Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/RelE-Phd |
| Location | 8688374..8688945 | Replicon | chromosome |
| Accession | NZ_CP073720 | ||
| Organism | Dactylosporangium fulvum strain NRRL B-16292 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | Dfulv_RS39915 | Protein ID | WP_259858993.1 |
| Coordinates | 8688688..8688945 (+) | Length | 86 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | - |
| Locus tag | Dfulv_RS39910 | Protein ID | WP_259858992.1 |
| Coordinates | 8688374..8688661 (+) | Length | 96 a.a. |
Genomic Context
Location: 8686062..8686520 (459 bp)
Type: Others
Protein ID: WP_259858990.1
Type: Others
Protein ID: WP_259858990.1
Location: 8686803..8687366 (564 bp)
Type: Others
Protein ID: WP_259858991.1
Type: Others
Protein ID: WP_259858991.1
Location: 8688374..8688661 (288 bp)
Type: Antitoxin
Protein ID: WP_259858992.1
Type: Antitoxin
Protein ID: WP_259858992.1
Location: 8688688..8688945 (258 bp)
Type: Toxin
Protein ID: WP_259858993.1
Type: Toxin
Protein ID: WP_259858993.1
Location: 8688975..8689469 (495 bp)
Type: Others
Protein ID: WP_259858994.1
Type: Others
Protein ID: WP_259858994.1
Location: 8689731..8689958 (228 bp)
Type: Others
Protein ID: WP_259858995.1
Type: Others
Protein ID: WP_259858995.1
Location: 8690285..8690542 (258 bp)
Type: Others
Protein ID: WP_259858996.1
Type: Others
Protein ID: WP_259858996.1
Location: 8690685..8691686 (1002 bp)
Type: Others
Protein ID: WP_259858997.1
Type: Others
Protein ID: WP_259858997.1
Location: 8693261..8693899 (639 bp)
Type: Others
Protein ID: WP_259858999.1
Type: Others
Protein ID: WP_259858999.1
Location: 8691832..8692341 (510 bp)
Type: Others
Protein ID: WP_259858998.1
Type: Others
Protein ID: WP_259858998.1
Loading, please wait
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Dfulv_RS39895 (Dfulv_39895) | 8686062..8686520 | + | 459 | WP_259858990.1 | peroxiredoxin | - |
| Dfulv_RS39905 (Dfulv_39905) | 8686803..8687366 | + | 564 | WP_259858991.1 | Uma2 family endonuclease | - |
| Dfulv_RS39910 (Dfulv_39910) | 8688374..8688661 | + | 288 | WP_259858992.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| Dfulv_RS39915 (Dfulv_39915) | 8688688..8688945 | + | 258 | WP_259858993.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| Dfulv_RS39920 (Dfulv_39920) | 8688975..8689469 | + | 495 | WP_259858994.1 | hypothetical protein | - |
| Dfulv_RS39925 (Dfulv_39925) | 8689731..8689958 | + | 228 | WP_259858995.1 | Uma2 family endonuclease | - |
| Dfulv_RS39930 (Dfulv_39930) | 8690285..8690542 | + | 258 | WP_259858996.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Dfulv_RS39935 (Dfulv_39935) | 8690685..8691686 | + | 1002 | WP_259858997.1 | NADP-dependent oxidoreductase | - |
| Dfulv_RS39940 (Dfulv_39940) | 8691832..8692341 | - | 510 | WP_259858998.1 | hypothetical protein | - |
| Dfulv_RS39945 (Dfulv_39945) | 8693261..8693899 | + | 639 | WP_259858999.1 | transporter | - |
Associated MGEs
Loading, please wait
MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 86 a.a. Molecular weight: 9603.98 Da Isoelectric Point: 9.3852
>T200128 WP_259858993.1 NZ_CP073720:8688688-8688945 [Dactylosporangium fulvum]
VKLTGPARRALETGLPEAVAWAAYTFITERLPTNPHRLGGELEGPYEGMRSAHLGTYRVVYRIDEETRTVYVLSIRLRGD
VYGIR
VKLTGPARRALETGLPEAVAWAAYTFITERLPTNPHRLGGELEGPYEGMRSAHLGTYRVVYRIDEETRTVYVLSIRLRGD
VYGIR
Download Length: 258 bp
>T200128 NZ_CP097716:167621-167806 [Escherichia coli]
GTGAAAAGTGCAGACGTGATCGCCATCCTGAAGCAGCATGGCTGGGAACATATTCGAACCCGTGGCAGTCATCATCAGTT
CCGCCACCCTGTTCATCCGGGTCTGGTGACGGTTCCGCACCCTAAAAAAGATATTAAGCCCGGTACGCTGGCGCAAATTG
GGCGTCAGGCTGGTTTAACATTTTAA
GTGAAAAGTGCAGACGTGATCGCCATCCTGAAGCAGCATGGCTGGGAACATATTCGAACCCGTGGCAGTCATCATCAGTT
CCGCCACCCTGTTCATCCGGGTCTGGTGACGGTTCCGCACCCTAAAAAAGATATTAAGCCCGGTACGCTGGCGCAAATTG
GGCGTCAGGCTGGTTTAACATTTTAA
Antitoxin
Download Length: 96 a.a. Molecular weight: 10115.34 Da Isoelectric Point: 4.3324
>AT200128 WP_259858992.1 NZ_CP073720:8688374-8688661 [Dactylosporangium fulvum]
MTQILNVTDAKARLSELVAAVATTHDNVEITRNGEPAAVLVSFEELRALRETVAILSDAAAVADIREAEEDIAAGRVTDA
EDLGDVMRARRRGAA
MTQILNVTDAKARLSELVAAVATTHDNVEITRNGEPAAVLVSFEELRALRETVAILSDAAAVADIREAEEDIAAGRVTDA
EDLGDVMRARRRGAA
Download Length: 288 bp
>AT200128 NZ_CP097716:167823-168233 [Escherichia coli]
ATGTTTTATCCCGCCTATATCCACAGTGATCCTGACGGCAGCGCCAGCGGTTTTTTCCCTGATGTTCCAGGCTGTTATTT
TGCTGGTGATACGCTGGACAACGCTTTCCAGGATGCGCGAAGTGCACTGGCCGCGCACTTCGAAACCTTATGCGAGATGG
ATGAAGAGTTGCCGCTTCCAGGCTCTGTGGAAACACATCTGGTCCAGCGTGCGCAGGACTTTATTGGCGGGCAATGGTTG
CTGGTGGATATCAATATGAATCAGTTCGAAGGTCGGGCTGAACGTATCAATATTACGATGCCGAAAAGGTTACTGAACAA
GATTGATACCTACGTGCGCAATAACCCAGACTACGCCAACAGAAGTGCGTTTCTGGCAGAAGCTGCCCGGCGTGTATTGC
CGGGCGTTTAA
ATGTTTTATCCCGCCTATATCCACAGTGATCCTGACGGCAGCGCCAGCGGTTTTTTCCCTGATGTTCCAGGCTGTTATTT
TGCTGGTGATACGCTGGACAACGCTTTCCAGGATGCGCGAAGTGCACTGGCCGCGCACTTCGAAACCTTATGCGAGATGG
ATGAAGAGTTGCCGCTTCCAGGCTCTGTGGAAACACATCTGGTCCAGCGTGCGCAGGACTTTATTGGCGGGCAATGGTTG
CTGGTGGATATCAATATGAATCAGTTCGAAGGTCGGGCTGAACGTATCAATATTACGATGCCGAAAAGGTTACTGAACAA
GATTGATACCTACGTGCGCAATAACCCAGACTACGCCAACAGAAGTGCGTTTCTGGCAGAAGCTGCCCGGCGTGTATTGC
CGGGCGTTTAA