Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | Hha-TomB/- |
| Location | 3594900..3595520 | Replicon | chromosome |
| Accession | NZ_CP072970 | ||
| Organism | Enterobacter sp. BWH 37 | ||
Toxin (Protein)
| Gene name | Hha | Uniprot ID | A0A837FFM2 |
| Locus tag | IBG18_RS17720 | Protein ID | WP_015571250.1 |
| Coordinates | 3595302..3595520 (+) | Length | 73 a.a. |
Antitoxin (Protein)
| Gene name | TomB | Uniprot ID | F5RUW7 |
| Locus tag | IBG18_RS17715 | Protein ID | WP_006809850.1 |
| Coordinates | 3594900..3595274 (+) | Length | 125 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IBG18_RS17705 | 3590027..3591220 | + | 1194 | WP_022650498.1 | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | - |
| IBG18_RS17710 | 3591243..3594389 | + | 3147 | WP_022650497.1 | multidrug efflux RND transporter permease subunit AcrB | - |
| IBG18_RS17715 | 3594900..3595274 | + | 375 | WP_006809850.1 | Hha toxicity modulator TomB | Antitoxin |
| IBG18_RS17720 | 3595302..3595520 | + | 219 | WP_015571250.1 | HHA domain-containing protein | Toxin |
| IBG18_RS17725 | 3595729..3596280 | + | 552 | WP_022650496.1 | maltose O-acetyltransferase | - |
| IBG18_RS17730 | 3596397..3596864 | + | 468 | WP_022650495.1 | YlaC family protein | - |
| IBG18_RS17735 | 3596836..3598296 | - | 1461 | WP_032608667.1 | PLP-dependent aminotransferase family protein | - |
| IBG18_RS17740 | 3598398..3599108 | + | 711 | WP_022650493.1 | GNAT family protein | - |
| IBG18_RS17745 | 3599105..3599245 | - | 141 | WP_032608666.1 | type B 50S ribosomal protein L36 | - |
| IBG18_RS17750 | 3599248..3599508 | - | 261 | WP_015571255.1 | type B 50S ribosomal protein L31 | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 73 a.a. Molecular weight: 8583.95 Da Isoelectric Point: 8.9008
>T199322 WP_015571250.1 NZ_CP072970:3595302-3595520 [Enterobacter sp. BWH 37]
MSDKPLTKVDYLMRLRRCQSIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFVR
MSDKPLTKVDYLMRLRRCQSIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFVR
Download Length: 219 bp
>T199322 NZ_CP097320:565066-565638 [Candidatus Mycobacterium methanotrophicum]
ATGAAGCGGCTCGATCTGGTCGTCGGACCCAACGGAGCCGGCAAGTCGACGTTCGTCGAACTCACCTTGGCGCCGCTGCT
GCCCGGCAGTGCCTTCGTCAATGCCGACGAGATCGCCCGACAACGCTGGCCCGATGACCCCGCCTCGCATGCGTATCAGG
CTGCGCGGGTGGCGGCAGAGACGAGGGCCAGGCTCATCGAGGTGGGCGCATCGTTCATCGCCGAGACGGTGTTCTCCCAT
CCGTCAAAGCTCGAACTGATCGATACCGCCCACGCGGGCGACTACACGATCGTCCTGCATGTCATGCTGATCCCCGAGGA
GCTCGCGGTCGAGCGGGTCCGGCACCGCGTCAGCGCCGGCGGACATCATGTGCCCGAGGATAAGATTCGCGAACGCTACC
AACGTCTTTGGGGGCTCGTCGCCGCCGCGACCAGCCGATGCGATTCGACAACCGTGTACGACAACAGCGCGCTGCAAGGC
CCCCGCATCATCGCGCAGATGAACGACGGCTTCCTCGTCGGCTCGTCGGCTTGGCCGGCGTGGACCCCCGACGCCCTCCG
GTCAGGTCGCTGA
ATGAAGCGGCTCGATCTGGTCGTCGGACCCAACGGAGCCGGCAAGTCGACGTTCGTCGAACTCACCTTGGCGCCGCTGCT
GCCCGGCAGTGCCTTCGTCAATGCCGACGAGATCGCCCGACAACGCTGGCCCGATGACCCCGCCTCGCATGCGTATCAGG
CTGCGCGGGTGGCGGCAGAGACGAGGGCCAGGCTCATCGAGGTGGGCGCATCGTTCATCGCCGAGACGGTGTTCTCCCAT
CCGTCAAAGCTCGAACTGATCGATACCGCCCACGCGGGCGACTACACGATCGTCCTGCATGTCATGCTGATCCCCGAGGA
GCTCGCGGTCGAGCGGGTCCGGCACCGCGTCAGCGCCGGCGGACATCATGTGCCCGAGGATAAGATTCGCGAACGCTACC
AACGTCTTTGGGGGCTCGTCGCCGCCGCGACCAGCCGATGCGATTCGACAACCGTGTACGACAACAGCGCGCTGCAAGGC
CCCCGCATCATCGCGCAGATGAACGACGGCTTCCTCGTCGGCTCGTCGGCTTGGCCGGCGTGGACCCCCGACGCCCTCCG
GTCAGGTCGCTGA
Antitoxin
Download Length: 125 a.a. Molecular weight: 14497.28 Da Isoelectric Point: 4.8989
>AT199322 WP_006809850.1 NZ_CP072970:3594900-3595274 [Enterobacter sp. BWH 37]
MDEYSPKRHDIAQLKFLCESLYHDCLANLEESNHGWVNDPTSAINLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYL
DDTFMLFSSYGINAQDLQKWRKSGNRLFRCFTNVSRANPVSLSC
MDEYSPKRHDIAQLKFLCESLYHDCLANLEESNHGWVNDPTSAINLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYL
DDTFMLFSSYGINAQDLQKWRKSGNRLFRCFTNVSRANPVSLSC
Download Length: 375 bp
>AT199322 NZ_CP097320:564638-565069 [Candidatus Mycobacterium methanotrophicum]
ATGGCGAACACCGCTGATCGAGTGACCCGCGTCGCCGCCGACCTAATGGACAGCGCGGCCGCCGAGGGTGCGCGACAAAG
CCGCTCGGCCAAGCAGCAGCTCGACCACTGGGCGCGGGTGGGACGCGCGGTGTCGAGTCAGCAGACGGCGGCCCGGCGCC
GGGTCGAGGCCGCGCTGACCGGCGATCTGGAGCTGCGCGAGCTGAGCGTCGAAGAGGGCGCGGTGTTCAACGCCGAGATC
GCCGCGGCCGTCGAAGAGAGATTGGCGGGATCGAATTACGGGACGCTGCTGGCCGAGCGCGGCATCACCACCGTGGCCCT
CGACGAGAACGGTGACATCGTCGAGCACCGCCCTGATGGGTCCTCGGTCGTGCTGGCCACGAAACGGCGAGCGCCACGAC
GCAGGAAGGCCCGCGCCGCGCCCACCCGATGA
ATGGCGAACACCGCTGATCGAGTGACCCGCGTCGCCGCCGACCTAATGGACAGCGCGGCCGCCGAGGGTGCGCGACAAAG
CCGCTCGGCCAAGCAGCAGCTCGACCACTGGGCGCGGGTGGGACGCGCGGTGTCGAGTCAGCAGACGGCGGCCCGGCGCC
GGGTCGAGGCCGCGCTGACCGGCGATCTGGAGCTGCGCGAGCTGAGCGTCGAAGAGGGCGCGGTGTTCAACGCCGAGATC
GCCGCGGCCGTCGAAGAGAGATTGGCGGGATCGAATTACGGGACGCTGCTGGCCGAGCGCGGCATCACCACCGTGGCCCT
CGACGAGAACGGTGACATCGTCGAGCACCGCCCTGATGGGTCCTCGGTCGTGCTGGCCACGAAACGGCGAGCGCCACGAC
GCAGGAAGGCCCGCGCCGCGCCCACCCGATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A837FFM2 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A837FGN8 |