Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/ParE-RelB |
| Location | 277108..277634 | Replicon | plasmid unnamed1 |
| Accession | NZ_CP072962 | ||
| Organism | Enterobacter sp. MGH 14 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | S1EXL1 |
| Locus tag | IBG17_RS24700 | Protein ID | WP_000323025.1 |
| Coordinates | 277108..277395 (-) | Length | 96 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | S1F6D3 |
| Locus tag | IBG17_RS24705 | Protein ID | WP_000534858.1 |
| Coordinates | 277395..277634 (-) | Length | 80 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IBG17_RS24665 | 272678..272854 | - | 177 | WP_001371930.1 | hypothetical protein | - |
| IBG17_RS24670 | 273365..274309 | + | 945 | WP_000778029.1 | DUF5417 domain-containing protein | - |
| IBG17_RS24675 | 274405..275007 | + | 603 | WP_012695474.1 | hypothetical protein | - |
| IBG17_RS24680 | 275067..275417 | + | 351 | WP_000743059.1 | hypothetical protein | - |
| IBG17_RS24685 | 275464..275667 | + | 204 | WP_001015183.1 | hypothetical protein | - |
| IBG17_RS24690 | 275949..276269 | + | 321 | WP_000332796.1 | hypothetical protein | - |
| IBG17_RS24695 | 276882..277007 | - | 126 | WP_229020258.1 | DUF5431 family protein | - |
| IBG17_RS24700 | 277108..277395 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin |
| IBG17_RS24705 | 277395..277634 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin |
| IBG17_RS26865 | 277659..277763 | + | 105 | Protein_287 | hypothetical protein | - |
| IBG17_RS24710 | 277897..278820 | - | 924 | WP_000167917.1 | cation diffusion facilitator family transporter | - |
| IBG17_RS24715 | 279020..279592 | - | 573 | WP_001515348.1 | cytochrome b/b6 domain-containing protein | - |
| IBG17_RS24720 | 280068..281306 | - | 1239 | WP_000219087.1 | IS110-like element ISEsa2 family transposase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Conjugative plasmid | blaSHV-30 / blaKPC-3 / aac(6')-Ib / ant(3'')-Ia / blaOXA-9 / blaTEM-1A / blaTEM-1B / aadA2 / qacE / sul1 / qnrB2 / dfrA19 / aph(3'')-Ib / aph(6)-Id / mcr-9 / aph(3')-Ia | - | 1..423968 | 423968 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 96 a.a. Molecular weight: 11225.22 Da Isoelectric Point: 10.1967
>T199308 WP_000323025.1 NZ_CP072962:c277395-277108 [Enterobacter sp. MGH 14]
MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGK
RERSEVYSEAVKRIL
MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGK
RERSEVYSEAVKRIL
Download Length: 288 bp
>T199308 NZ_CP097291:3826476-3826730 [Providencia sp. PROV188]
ATGAAAACCATTTCCTTTAGTGATGCTAGAAGCAATTTGAAAGCAGTGCTTGATAGAGTTGTTGATGATATGGATACGAC
GATTATAACCCGCCGTGATTCTGAAGCGGCTGTAGTTATGTCCTTGGAATACTACAATAGTTTAATGGAAACCATCTACC
TATTGCGCTCTCCTGCAAATGCAGAGCATCTCAACAAATCCATCGAGCAATTTAAAGCGGGTAAGATTTCAGAGAGAAAG
CTAATCAATGAGTAG
ATGAAAACCATTTCCTTTAGTGATGCTAGAAGCAATTTGAAAGCAGTGCTTGATAGAGTTGTTGATGATATGGATACGAC
GATTATAACCCGCCGTGATTCTGAAGCGGCTGTAGTTATGTCCTTGGAATACTACAATAGTTTAATGGAAACCATCTACC
TATTGCGCTCTCCTGCAAATGCAGAGCATCTCAACAAATCCATCGAGCAATTTAAAGCGGGTAAGATTTCAGAGAGAAAG
CTAATCAATGAGTAG
Antitoxin
Download Length: 80 a.a. Molecular weight: 9071.48 Da Isoelectric Point: 4.5230
>AT199308 WP_000534858.1 NZ_CP072962:c277634-277395 [Enterobacter sp. MGH 14]
MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL
MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL
Download Length: 240 bp
>AT199308 NZ_CP097291:3826723-3826983 [Providencia sp. PROV188]
ATGAGTAGACTTCTAACATGGACGGATCAAGCTTGGGAAGATTATCTATACTGGCAAAGCCAAGATAAAAAGACATTAAA
GCGGATCAATAAACTCATTGAAGACACAAAAAGAACGCCATTCAGCGGTATAGGTAAACCAGAGCCACTAAAAGAAAACT
TAGCTGGCTTCTGGTCTCGTAGAATAGATGAAACTAATAGGCTAGTTTATGCAATCGAAAATACCGCACTAATCATCATT
GCCTGTCGCTATCATTACTAG
ATGAGTAGACTTCTAACATGGACGGATCAAGCTTGGGAAGATTATCTATACTGGCAAAGCCAAGATAAAAAGACATTAAA
GCGGATCAATAAACTCATTGAAGACACAAAAAGAACGCCATTCAGCGGTATAGGTAAACCAGAGCCACTAAAAGAAAACT
TAGCTGGCTTCTGGTCTCGTAGAATAGATGAAACTAATAGGCTAGTTTATGCAATCGAAAATACCGCACTAATCATCATT
GCCTGTCGCTATCATTACTAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|