Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relE-dinJ/YafQ-RelB |
| Location | 693498..694029 | Replicon | chromosome |
| Accession | NZ_CP072898 | ||
| Organism | Bartonella henselae strain FR96/BK38 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | X5M5T9 |
| Locus tag | KAE75_RS03155 | Protein ID | WP_011180281.1 |
| Coordinates | 693498..693779 (-) | Length | 94 a.a. |
Antitoxin (Protein)
| Gene name | dinJ | Uniprot ID | A0A0H3LWD6 |
| Locus tag | KAE75_RS03160 | Protein ID | WP_011180280.1 |
| Coordinates | 693766..694029 (-) | Length | 88 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KAE75_RS03120 (KAE75_03090) | 688664..689059 | + | 396 | WP_011180290.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| KAE75_RS03125 (KAE75_03095) | 689532..689852 | + | 321 | WP_011180288.1 | hypothetical protein | - |
| KAE75_RS03130 (KAE75_03100) | 689856..690434 | + | 579 | WP_011180287.1 | hypothetical protein | - |
| KAE75_RS03135 (KAE75_03105) | 691031..691573 | + | 543 | WP_034454135.1 | antA/AntB antirepressor family protein | - |
| KAE75_RS03140 (KAE75_03110) | 691605..692444 | + | 840 | WP_011180284.1 | antA/AntB antirepressor family protein | - |
| KAE75_RS03145 (KAE75_03115) | 692461..693180 | + | 720 | WP_034454133.1 | phage regulatory protein/antirepressor Ant | - |
| KAE75_RS03150 (KAE75_03120) | 693177..693455 | + | 279 | WP_011180242.1 | hypothetical protein | - |
| KAE75_RS03155 (KAE75_03125) | 693498..693779 | - | 282 | WP_011180281.1 | type II toxin-antitoxin system YafQ family toxin | Toxin |
| KAE75_RS03160 (KAE75_03130) | 693766..694029 | - | 264 | WP_011180280.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
| KAE75_RS03165 (KAE75_03135) | 694439..694735 | - | 297 | WP_034454130.1 | HigA family addiction module antitoxin | - |
| KAE75_RS03170 (KAE75_03140) | 694752..695066 | - | 315 | WP_011180277.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KAE75_RS03175 (KAE75_03145) | 695129..695680 | + | 552 | WP_034454327.1 | hypothetical protein | - |
| KAE75_RS03180 (KAE75_03150) | 695711..697639 | + | 1929 | WP_034454128.1 | phage terminase large subunit family protein | - |
| KAE75_RS03185 (KAE75_03155) | 697643..697891 | + | 249 | WP_011180274.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 670210..737217 | 67007 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 94 a.a. Molecular weight: 11106.85 Da Isoelectric Point: 10.3380
>T199107 WP_011180281.1 NZ_CP072898:c693779-693498 [Bartonella henselae]
MRTIERTTIFKRDFKREMKGQHRHLLDTDLRKVIAALANDQPLEIRYRDHALTGNWSNYRDCHIRPDLVLIYRLIGQDRL
VLVRLGSHSQLDL
MRTIERTTIFKRDFKREMKGQHRHLLDTDLRKVIAALANDQPLEIRYRDHALTGNWSNYRDCHIRPDLVLIYRLIGQDRL
VLVRLGSHSQLDL
Download Length: 282 bp
>T199107 NZ_CP097190:799835-800245 [Klebsiella pneumoniae]
GTGGTCCTGTGGCAATCTGATCTCCGTATCTCCTGGCGCGCGCAGTGGTTTTCCCTGCTGCTTCACGGCGTGGTGGCGGC
CCTGGTGCTGTTGGTTCCCTGGCCGCTGAGCTATACCCCGATCTGGCTGCTGCTGCTGTCGCTGGTGGTCTTCGACTGCG
TGCGCAGCCAGCGGCGGATCCATGCCCGTCGCGGGGAGATAAAACTGCTCACCGATTCCCGTCTTCGCTGGCAAAACGCC
GAATGGGAAATCCTCGGGACGCCGTGGGTTATCAATAGCGGTATGCTGCTGCGTTTGCGCCATGTCGATACCCGGCGCGG
ACAGCATCTTTGGCTGGCGGCGGACAGCATGGACGCCGGAGAGTGGCGCGATCTGCGCCGGCTGGTGCTGCAAAAACCGG
CGCAGGAGTAA
GTGGTCCTGTGGCAATCTGATCTCCGTATCTCCTGGCGCGCGCAGTGGTTTTCCCTGCTGCTTCACGGCGTGGTGGCGGC
CCTGGTGCTGTTGGTTCCCTGGCCGCTGAGCTATACCCCGATCTGGCTGCTGCTGCTGTCGCTGGTGGTCTTCGACTGCG
TGCGCAGCCAGCGGCGGATCCATGCCCGTCGCGGGGAGATAAAACTGCTCACCGATTCCCGTCTTCGCTGGCAAAACGCC
GAATGGGAAATCCTCGGGACGCCGTGGGTTATCAATAGCGGTATGCTGCTGCGTTTGCGCCATGTCGATACCCGGCGCGG
ACAGCATCTTTGGCTGGCGGCGGACAGCATGGACGCCGGAGAGTGGCGCGATCTGCGCCGGCTGGTGCTGCAAAAACCGG
CGCAGGAGTAA
Antitoxin
Download Length: 88 a.a. Molecular weight: 9565.81 Da Isoelectric Point: 4.1403
>AT199107 WP_011180280.1 NZ_CP072898:c694029-693766 [Bartonella henselae]
MATSRMVQARVPEEIQNVASQVIQASGLTVSDVVRVLMTRIAQDKAIPSVLFQPNAETIAAFAEVDEGNLKKFHSVDELF
DDLYADD
MATSRMVQARVPEEIQNVASQVIQASGLTVSDVVRVLMTRIAQDKAIPSVLFQPNAETIAAFAEVDEGNLKKFHSVDELF
DDLYADD
Download Length: 264 bp
>AT199107 NZ_CP097190:799588-799854 [Klebsiella pneumoniae]
ATGGACATTAACAATAAAGCACGTATCCACTGGGCATGCCGCCGCGGGATGCGCGAACTCGACATCTCCATCATGCCGTT
CTTTGAGTATGAGTACGATACCCTCAGCGACGCTGACAAACAGCTGTTCATTCGCCTGCTGGAAAATGACGATCCGGATC
TGTTCAACTGGCTGATGAACCACGGCAAACCGGCCGATGCGGAGCTGCAGCGGATGGTAACCTTAATTCAGACACGGAAT
CGGGAACGTGGTCCTGTGGCAATCTGA
ATGGACATTAACAATAAAGCACGTATCCACTGGGCATGCCGCCGCGGGATGCGCGAACTCGACATCTCCATCATGCCGTT
CTTTGAGTATGAGTACGATACCCTCAGCGACGCTGACAAACAGCTGTTCATTCGCCTGCTGGAAAATGACGATCCGGATC
TGTTCAACTGGCTGATGAACCACGGCAAACCGGCCGATGCGGAGCTGCAGCGGATGGTAACCTTAATTCAGACACGGAAT
CGGGAACGTGGTCCTGTGGCAATCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A0R4J6H3 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A0H3LWD6 |