Detailed information of TA system TA197182

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): EcnAB/-
• Location: 529424..529790
• Replicon: chromosome
• Accession: NZ_CP071955
• Organism: Xanthomonas fragariae strain YL19

Toxin (Protein)

• Gene name: EcnB
• Uniprot ID: -
• Locus tag: J5I97_RS02445
• Protein ID: WP_208588796.1
• Coordinates: 529656..529790 (+)
• Length: 45 a.a.

Antitoxin (Protein)

• Gene name: EcnA
• Uniprot ID: -
• Locus tag: J5I97_RS02440
• Protein ID: WP_208588793.1
• Coordinates: 529424..529576 (+)
• Length: 51 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
J5I97_RS02420	525076..525375	-	300	WP_208588786.1	hypothetical protein	-
J5I97_RS02425	525380..526396	-	1017	WP_238135624.1	hypothetical protein	-
J5I97_RS02430	527514..528197	-	684	WP_208588787.1	dTMP kinase	-
J5I97_RS02435	528392..529315	+	924	WP_208588790.1	arginase	-
J5I97_RS02440	529424..529576	+	153	WP_208588793.1	entericidin A/B family lipoprotein	Antitoxin
J5I97_RS02445	529656..529790	+	135	WP_208588796.1	entericidin A/B family lipoprotein	Toxin
J5I97_RS02450	530115..531404	+	1290	WP_208588797.1	tryptophan--tRNA ligase	-
J5I97_RS02455	531497..531661	+	165	WP_208591856.1	hypothetical protein	-
J5I97_RS02465	531948..532541	+	594	Protein_462	drug/metabolite exporter YedA	-
J5I97_RS02470	532559..533467	+	909	WP_208588801.1	EamA family transporter RarD	-
J5I97_RS02475	533527..534642	-	1116	WP_208588802.1	alpha/beta fold hydrolase	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Entericidin A/B (23-42)

Antitoxin

• Entericidin A/B (23-42)

Sequences

Toxin

Protein

• Length: 45 a.a.
• Molecular weight: 4443.31 Da
• Isoelectric Point: 10.2040

>T197182 WP_208588796.1 NZ_CP071955:529656-529790 [Xanthomonas fragariae]
MKRAIVLLVLSVLSVGMLSGCNTVAGAGKDVKGAGEKVEDAARK

Nucleotide

• Length: 135 bp

>T197182 NZ_CP095770:2743540-2744115 [Pseudomonas aeruginosa]
ATGAGGCATTCCCCATTCACCGCCGTCTACGACGCGTGCGTTCTATATCCCGCGCCACTGCGGGATTTCCTGATGTGGCT
CGGCCTGTCTGGCCGCTTCCGGGCGCGGTGGAGCCAAGCCATTCATGAGGAGTGGAAACGCAACCTGTTGATCAACCGCC
CCGATCTCACCCGGGTTCAGGTCGACAGGACGTCGGATCTCATGGACAGGGCCATTCCGGACGGCTTGGTGGAGGGCTAC
GAAGCGCTCGTGGCAGGCCTGACATTACCCGATCCGAATGATCGGCACGTCCTGGCTGCGGCGATTCGCTGCGGTGCGAG
CGTGATTGTGACGTTCAACGAACGTGATTTCCCGAACGATCTGCTGGCTCCGTACGGCATCGAATCGCAGCACCCCGATG
AGTTTGTGGACAACCTGCTGGATCTGGATGCGGCCGCCGTAGTGTCGGCTGCGCAGCGCCAGCGTGCCCAACTCAAGCAT
CCGCCGATCGATGTGGACCGCTATCTCGAAATCCTGCTGCGCCAAGGCCTTGTGCAAACGACCAAGGTGCTGGCGACCTA
TCGCACCATTCTCTGA

Antitoxin

Protein

• Length: 51 a.a.
• Molecular weight: 5203.17 Da
• Isoelectric Point: 9.4952

>AT197182 WP_208588793.1 NZ_CP071955:529424-529576 [Xanthomonas fragariae]
MKRLLTLMVLGLFSVGVMTGCNTVAGAGKDIQRAGSKVEKKADNCSDGKC

Nucleotide

• Length: 153 bp

>AT197182 NZ_CP095770:2743073-2743543 [Pseudomonas aeruginosa]
ATGACCACCGCCACTGCCCAATCCAAGATGACCCTTCCCGCCGCGGGAGAGGTTAAGGCAGCCGTCCAGGGTCAACGTGC
CTTGGCGGCTTACCTCGCAACCCAGTTCGAGACGCAGCACATCCAGATCTTTGATGACCACAAACAGGCTCATCAGGTGG
AACTGCCTACCTCGGCTTTACGCCTGCTGGTCGACATCCTGGCCGAGTTGGCCGATGGCAATGCAGTAAAGGTGGTGCCC
GTCCATGCAGAGCTGACGACCCAAGAGGCGGCGGACTTGCTCAACGTGTCCCGTCCCCATTTCGTCAAGCTGCTAGAAGA
TGGGGTGTTGGCATTTCATCGCACCGGCAAGCACCGCAGGGTGAGGTTCGCCGATCTGATGCAGTACAAGGAAGCGCGCG
AGCGCGCCAGTGAGCAGGCGATGGCCGAACTCGCTCAGCAGTCGCAAGAGTTGGGAATGGGATACGAATGA