Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YoeB-RelB
Location 1785508..1786013 Replicon chromosome
Accession NZ_CP071903
Organism Mucilaginibacter rubeus strain P2-22.5

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag J3L20_RS07845 Protein ID WP_090532546.1
Coordinates 1785759..1786013 (+) Length 85 a.a.

Antitoxin (Protein)


Gene name relE Uniprot ID -
Locus tag J3L20_RS07840 Protein ID WP_090532548.1
Coordinates 1785508..1785762 (+) Length 85 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
J3L20_RS07830 1781568..1782337 + 770 Protein_1534 lytic transglycosylase domain-containing protein -
J3L20_RS07835 1782553..1785399 + 2847 WP_112655611.1 excinuclease ABC subunit UvrA -
J3L20_RS07840 1785508..1785762 + 255 WP_090532548.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin
J3L20_RS07845 1785759..1786013 + 255 WP_090532546.1 Txe/YoeB family addiction module toxin Toxin
J3L20_RS07850 1786059..1787846 + 1788 WP_112655609.1 DUF885 domain-containing protein -
J3L20_RS07855 1787982..1788866 - 885 WP_112655608.1 UbiA family prenyltransferase -
J3L20_RS07860 1788997..1789524 + 528 WP_112655606.1 YceI family protein -
J3L20_RS07865 1789543..1790652 + 1110 WP_112655604.1 type III polyketide synthase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(2-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-72)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 10205.76 Da        Isoelectric Point: 9.3469

>T197128 WP_090532546.1 NZ_CP071903:1785759-1786013 [Mucilaginibacter rubeus]
VKIIFQNPAWEDYLYWQTTDKSILKKINSLIKEIERTPYEGSGKPEPLKHNLAGWWSRRINLEHRLIYRVEADAIFILQC
RYHY

Download         Length: 255 bp

>T197128 NZ_CP095741:c820770-820366 [Luteibacter aegosomaticola]
ATGGAAGGGCTCACCTTCCTCGATAGCAACGTGGTGCTCTACCTGCTTTCCGAAGATACCGAGAAGCACGACATCGCGAT
GGACCTCCTGTCGCGGCGGCCGGCGGTTAGCGTGCAGGTGCTGAACGAAGTCACCAACGTTTGCCGCAAGAAGGCTGGCA
TGTCGTGGGAAGAGGTTGCGGCATTCCTTGCCAGCATCCGGCATTTCTGCCCCGTGGTCAGCCTGACAGCGGATATCCAC
GACAGCGCGCGCCGGCTCGCCGCGCGGCACAAGCTGTCGTTTTATGATGCGAACATCGTTGCCGCCGCCATCGATAGCGG
CGCGGCCGTCGTCTGGTCAGAGGCCATGCACCACGGCCTGGTCATCGAACATACCGTGACCGTGGTGAATCCCTTCAAGG
GGTAA

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9776.16 Da        Isoelectric Point: 5.7377

>AT197128 WP_090532548.1 NZ_CP071903:1785508-1785762 [Mucilaginibacter rubeus]
MEITTYTAFRQQLKSFLDKVRNDHKPLVVTSANAEDIVVISKADYESMEETFYLLKSPKNAERLLHGIQEYEKGLGKERK
LLEE

Download         Length: 255 bp

>AT197128 NZ_CP095741:c821000-820770 [Luteibacter aegosomaticola]
ATGCGCGTATCCAAATGGGGCAACAGCCTTGGCATCCGGCTTCCGGCTGCCGTCGTGGAGGCACTGGGCTTGAGAGAAGG
AGACGACGTCGTGTTGTATGCAAAAGGAGCTCGCGAATTCGCCGTGGAGCGTGGCCCGCGCGATGAAGAAGTCCTCGAGC
GCCTGCGCGCACTGAAGGGCCGGCTGCCCGCCGATTTCCGCTTCGATCGCGATGATGCCAACGAGCGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References