Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/ParE-RelB |
| Location | 1051016..1051544 | Replicon | chromosome |
| Accession | NZ_CP071771 | ||
| Organism | Acinetobacter towneri strain GX7 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | J4G46_RS05030 | Protein ID | WP_208012283.1 |
| Coordinates | 1051016..1051309 (-) | Length | 98 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | N9CRA2 |
| Locus tag | J4G46_RS05035 | Protein ID | WP_004970507.1 |
| Coordinates | 1051299..1051544 (-) | Length | 82 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J4G46_RS04990 (J4G46_04990) | 1046368..1046862 | + | 495 | WP_004970523.1 | flavin reductase | - |
| J4G46_RS04995 (J4G46_04995) | 1046934..1047224 | + | 291 | WP_019836372.1 | type II toxin-antitoxin system HigB family toxin | - |
| J4G46_RS05000 (J4G46_05000) | 1047226..1047627 | + | 402 | WP_004970519.1 | helix-turn-helix domain-containing protein | - |
| J4G46_RS05010 (J4G46_05010) | 1047968..1048252 | - | 285 | WP_004970518.1 | cell division protein ZapA | - |
| J4G46_RS05015 (J4G46_05015) | 1048254..1048805 | - | 552 | WP_019836370.1 | hypothetical protein | - |
| J4G46_RS05020 (J4G46_05020) | 1048870..1049508 | + | 639 | WP_004970514.1 | UPF0149 family protein | - |
| J4G46_RS05025 (J4G46_05025) | 1049602..1050936 | + | 1335 | WP_154320488.1 | Xaa-Pro aminopeptidase | - |
| J4G46_RS05030 (J4G46_05030) | 1051016..1051309 | - | 294 | WP_208012283.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| J4G46_RS05035 (J4G46_05035) | 1051299..1051544 | - | 246 | WP_004970507.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
| J4G46_RS05040 (J4G46_05040) | 1051917..1053125 | + | 1209 | WP_179991267.1 | 2-octaprenyl-6-methoxyphenyl hydroxylase | - |
| J4G46_RS05045 (J4G46_05045) | 1053122..1054372 | + | 1251 | WP_154320491.1 | FAD-dependent monooxygenase | - |
| J4G46_RS05050 (J4G46_05050) | 1054549..1054797 | + | 249 | WP_004972644.1 | hypothetical protein | - |
| J4G46_RS05055 (J4G46_05055) | 1054990..1055832 | - | 843 | WP_179991266.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| J4G46_RS05060 (J4G46_05060) | 1056038..1056466 | + | 429 | WP_004972647.1 | YraN family protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 98 a.a. Molecular weight: 11309.46 Da Isoelectric Point: 10.2657
>T196899 WP_208012283.1 NZ_CP071771:c1051309-1051016 [Acinetobacter towneri]
MTYNLLRHKDFTAEWEKLPSAIRDQFKKKLAKVIEQPHIPKNMLKGDLAGCYKIKLLKAGVRLIYQVKDDQVVILLITVG
KRADNIVYDEAKKWIKD
MTYNLLRHKDFTAEWEKLPSAIRDQFKKKLAKVIEQPHIPKNMLKGDLAGCYKIKLLKAGVRLIYQVKDDQVVILLITVG
KRADNIVYDEAKKWIKD
Download Length: 294 bp
>T196899 NZ_CP095510:c1087667-1087290 [Escherichia coli]
ATGAAAACATTACCCGACACACACGTACGGGCGGCATCGCGCTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTCAC
CCGACTGCTGGACCAGCACTATGGCCTCACGCTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG
AGGCAGGGATTTCACTGTGTGACGCGGTGAACTTTCTCGTTGAAAAATACGCGCTGGTACGTACCGACCAGCCGGGATTC
AGCGCAGGAGCCCCGTCGCAGTTAATCAACAGCATTGATATTCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGGAA
CAATTACAGAATGGTAAATAACATTACCCAGGGCAAGCATCCGGAGGCAAAACGATGA
ATGAAAACATTACCCGACACACACGTACGGGCGGCATCGCGCTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTCAC
CCGACTGCTGGACCAGCACTATGGCCTCACGCTGAATGACACACCGTTCGCTGATGAACGTGTGATTGAGCAGCATATTG
AGGCAGGGATTTCACTGTGTGACGCGGTGAACTTTCTCGTTGAAAAATACGCGCTGGTACGTACCGACCAGCCGGGATTC
AGCGCAGGAGCCCCGTCGCAGTTAATCAACAGCATTGATATTCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGGAA
CAATTACAGAATGGTAAATAACATTACCCAGGGCAAGCATCCGGAGGCAAAACGATGA
Antitoxin
Download Length: 82 a.a. Molecular weight: 9238.59 Da Isoelectric Point: 4.2703
>AT196899 WP_004970507.1 NZ_CP071771:c1051544-1051299 [Acinetobacter towneri]
MATVNFRVDEALKEKSYSILKEQGISPTDFFTNILEYVATTGKLPVQKALLSEEDAELLALVRKRMNDPKEMFEEVTLDD
L
MATVNFRVDEALKEKSYSILKEQGISPTDFFTNILEYVATTGKLPVQKALLSEEDAELLALVRKRMNDPKEMFEEVTLDD
L
Download Length: 246 bp
>AT196899 NZ_CP095510:c1088124-1087744 [Escherichia coli]
ATGTCGGACACACTCCCCGGAACAACGCTTCCCGACGACAACAAAGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGAC
GCCCTGTTTCGGCGCCCGTCTGTTGCAGGAGGGTAACCGGTTGCATTACCTTGCAGACCGCGCCGGTATCAGGGGCCGGT
TCAGCAATGCGGATGCATACCATCTGGACCAGGCTTTTCCACTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCGAAAGGGCTGACCTGCGATGCCGACACCCTCGGGTCCTG
TGGTTACGTTTATCTGGCTGTTTATCCTGCGACCGAAACGGAAAGTAACCCTCCGGAATAG
ATGTCGGACACACTCCCCGGAACAACGCTTCCCGACGACAACAAAGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGAC
GCCCTGTTTCGGCGCCCGTCTGTTGCAGGAGGGTAACCGGTTGCATTACCTTGCAGACCGCGCCGGTATCAGGGGCCGGT
TCAGCAATGCGGATGCATACCATCTGGACCAGGCTTTTCCACTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGT
GAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCGAAAGGGCTGACCTGCGATGCCGACACCCTCGGGTCCTG
TGGTTACGTTTATCTGGCTGTTTATCCTGCGACCGAAACGGAAAGTAACCCTCCGGAATAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|