Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | /HTH_XRE(antitoxin) |
| Location | 2830817..2831614 | Replicon | chromosome |
| Accession | NZ_CP071594 | ||
| Organism | Staphylococcus aureus strain PNID0137 | ||
Toxin (Protein)
| Gene name | - | Uniprot ID | - |
| Locus tag | J3R87_RS14145 | Protein ID | WP_000525008.1 |
| Coordinates | 2831153..2831614 (+) | Length | 154 a.a. |
Antitoxin (Protein)
| Gene name | - | Uniprot ID | A0A0C2LD36 |
| Locus tag | J3R87_RS14140 | Protein ID | WP_001260487.1 |
| Coordinates | 2830817..2831140 (+) | Length | 108 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3R87_RS14080 (2826217) | 2826217..2827005 | - | 789 | WP_000134097.1 | ATP-binding protein | - |
| J3R87_RS14085 (2826998) | 2826998..2827219 | - | 222 | WP_000815403.1 | DUF2483 family protein | - |
| J3R87_RS14090 (2827229) | 2827229..2827489 | - | 261 | WP_000291090.1 | DUF1108 family protein | - |
| J3R87_RS14095 (2827586) | 2827586..2827747 | - | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| J3R87_RS14100 (2827740) | 2827740..2827961 | - | 222 | WP_000594789.1 | hypothetical protein | - |
| J3R87_RS14105 (2828032) | 2828032..2828262 | + | 231 | WP_000395455.1 | hypothetical protein | - |
| J3R87_RS14110 (2828453) | 2828453..2828677 | - | 225 | WP_000187184.1 | hypothetical protein | - |
| J3R87_RS14115 (2828678) | 2828678..2829469 | - | 792 | WP_001157019.1 | phage antirepressor KilAC domain-containing protein | - |
| J3R87_RS14120 (2829526) | 2829526..2829765 | + | 240 | WP_000438628.1 | hypothetical protein | - |
| J3R87_RS14125 (2829755) | 2829755..2829934 | - | 180 | WP_000393082.1 | hypothetical protein | - |
| J3R87_RS14130 (2829949) | 2829949..2830392 | - | 444 | WP_000435356.1 | hypothetical protein | - |
| J3R87_RS14135 (2830405) | 2830405..2830653 | - | 249 | WP_000272859.1 | helix-turn-helix transcriptional regulator | - |
| J3R87_RS14140 (2830817) | 2830817..2831140 | + | 324 | WP_001260487.1 | helix-turn-helix transcriptional regulator | Antitoxin |
| J3R87_RS14145 (2831153) | 2831153..2831614 | + | 462 | WP_000525008.1 | hypothetical protein | Toxin |
| J3R87_RS14150 (2831798) | 2831798..2832730 | + | 933 | WP_000392183.1 | hypothetical protein | - |
| J3R87_RS14155 (2832710) | 2832710..2832889 | - | 180 | WP_000337827.1 | hypothetical protein | - |
| J3R87_RS14160 (2833002) | 2833002..2834048 | + | 1047 | WP_001145722.1 | tyrosine-type recombinase/integrase | - |
| J3R87_RS14165 (2834093) | 2834093..2835238 | + | 1146 | WP_029265169.1 | radical SAM/CxCxxxxC motif protein YfkAB | - |
| J3R87_RS14170 (2835498) | 2835498..2836028 | - | 531 | WP_000184383.1 | acyl-CoA thioesterase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 2789257..2834048 | 44791 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 154 a.a. Molecular weight: 18034.35 Da Isoelectric Point: 4.6899
>T196596 WP_000525008.1 NZ_CP071594:2831153-2831614 [Staphylococcus aureus]
MGLYEETLIQHDYIEIREADVLPDNLDGVWLGDLILIKRGLSDREKAGILFEELAHNKLTYGDIADYSNFNNRKFENYAR
RHGFISAVPLREIVEAHNYGVRNLYELSEYLQLSEEYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI
MGLYEETLIQHDYIEIREADVLPDNLDGVWLGDLILIKRGLSDREKAGILFEELAHNKLTYGDIADYSNFNNRKFENYAR
RHGFISAVPLREIVEAHNYGVRNLYELSEYLQLSEEYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI
Download Length: 462 bp
>T196596 NZ_CP095171:c50214-49798 [Enterobacter roggenkampii]
ATGAAGAAAACCTGGATGCTCGACACTAACATCTGCTCGTTCATCATGCGCGAGCAGCCGGCAGCGGTGCTGAAGCGCCT
GGAGCAGGTGGTGCTGCGCGGTGATCGCATCGTGGTCTCGGCCGTGACGTATGCCGAGATGCGCTTCGGCGCCACCGGCC
CGAAGGCCTCGCCGCGCCATATTCAGCTGGTCGACGCGTTCTGCGCGCGCCTCGATGCCATCCTGCCCTGGGACCGGGCT
GCGGTGGACGCCACGACGGACATCCGGGTGGCGCTGCGCCTCGCCGGGACGCCGATCGGCCCGAACGACACCGCCATTGC
CGGACACGCCATCGCGGCGGGCGCCATCCTGGTGACGAATAATACAAGAGAGTTTGAGCGGGTGCCGGGTCTGGTTCTGG
AAGACTGGGTTAAGTAA
ATGAAGAAAACCTGGATGCTCGACACTAACATCTGCTCGTTCATCATGCGCGAGCAGCCGGCAGCGGTGCTGAAGCGCCT
GGAGCAGGTGGTGCTGCGCGGTGATCGCATCGTGGTCTCGGCCGTGACGTATGCCGAGATGCGCTTCGGCGCCACCGGCC
CGAAGGCCTCGCCGCGCCATATTCAGCTGGTCGACGCGTTCTGCGCGCGCCTCGATGCCATCCTGCCCTGGGACCGGGCT
GCGGTGGACGCCACGACGGACATCCGGGTGGCGCTGCGCCTCGCCGGGACGCCGATCGGCCCGAACGACACCGCCATTGC
CGGACACGCCATCGCGGCGGGCGCCATCCTGGTGACGAATAATACAAGAGAGTTTGAGCGGGTGCCGGGTCTGGTTCTGG
AAGACTGGGTTAAGTAA
Antitoxin
Download Length: 108 a.a. Molecular weight: 12431.09 Da Isoelectric Point: 9.3811
>AT196596 WP_001260487.1 NZ_CP071594:2830817-2831140 [Staphylococcus aureus]
MRTSAEIGKLIKQLRKENNVNLTDFATKIGVNKSTLSRYENGSRKIPMEDIAEIANALKVTPEYLLLKNRQTENEVQHRA
AHLEGELTDDEWQRVLDYADYIRSKRK
MRTSAEIGKLIKQLRKENNVNLTDFATKIGVNKSTLSRYENGSRKIPMEDIAEIANALKVTPEYLLLKNRQTENEVQHRA
AHLEGELTDDEWQRVLDYADYIRSKRK
Download Length: 324 bp
>AT196596 NZ_CP095171:c50441-50211 [Enterobacter roggenkampii]
ATGCGCACAGTATCGATATTTAAAAACGGCAATAACCGCGCCATCCGTCTGCCCCGGGACCTGGATTTTGACGGCGTCAG
CGAGCTGGAGATCGTCCGGGAAGGGGACAGCATCATTCTGCGTCCCGTCCGGCCGACCTGGGGCTCGTTCGCGCAGCTAG
ACAGGGCCGATCCGGACTTTATGGCGCAGCGTGAGGATGTGGTCAGCGACGAAGGACGCTTTGATCCATGA
ATGCGCACAGTATCGATATTTAAAAACGGCAATAACCGCGCCATCCGTCTGCCCCGGGACCTGGATTTTGACGGCGTCAG
CGAGCTGGAGATCGTCCGGGAAGGGGACAGCATCATTCTGCGTCCCGTCCGGCCGACCTGGGGCTCGTTCGCGCAGCTAG
ACAGGGCCGATCCGGACTTTATGGCGCAGCGTGAGGATGTGGTCAGCGACGAAGGACGCTTTGATCCATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|