Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tsbAT/-
Location 957682..958453 Replicon chromosome
Accession NZ_CP071512
Organism Staphylococcus haemolyticus strain 1b

Toxin (Protein)


Gene name tsbT Uniprot ID -
Locus tag J2N83_RS04915 Protein ID WP_141738627.1
Coordinates 958304..958453 (+) Length 50 a.a.

Antitoxin (Protein)


Gene name tsbA Uniprot ID -
Locus tag J2N83_RS04910 Protein ID WP_053025425.1
Coordinates 957682..958281 (+) Length 200 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
J2N83_RS04890 953565..955019 + 1455 WP_053025432.1 ABC transporter substrate-binding protein/permease -
J2N83_RS04895 955012..955734 + 723 WP_037552178.1 amino acid ABC transporter ATP-binding protein -
J2N83_RS04900 955912..957039 + 1128 WP_053025430.1 tRNA epoxyqueuosine(34) reductase QueG -
J2N83_RS04905 957040..957510 + 471 WP_053025428.1 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL -
J2N83_RS04910 957682..958281 + 600 WP_053025425.1 glucosamine-6-phosphate isomerase Antitoxin
J2N83_RS04915 958304..958453 + 150 WP_141738627.1 hypothetical protein Toxin
J2N83_RS04920 958664..959059 + 396 WP_053025423.1 hypothetical protein -
J2N83_RS04925 959265..960650 + 1386 WP_053025421.1 class II fumarate hydratase -
J2N83_RS04930 960716..961540 - 825 WP_053025419.1 RluA family pseudouridine synthase -
J2N83_RS04935 961728..962837 + 1110 WP_207323845.1 GAF domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Glucosamine-6-phosphate isomerase

(130-195)


Sequences

Toxin        


Download         Length: 50 a.a.        Molecular weight: 5824.20 Da        Isoelectric Point: 3.9484

>T196504 WP_141738627.1 NZ_CP071512:958304-958453 [Staphylococcus haemolyticus]
MTKNKDSELNYHEEENAMVQDLDDLKTLGKEMEQISEENDEDRLNQSHE

Download         Length: 150 bp

>T196504 NZ_CP095145:799624-800034 [Klebsiella pneumoniae]
GTGGTCCTGTGGCAATCTGATCTCCGTATCTCCTGGCGCGCGCAGTGGTTTTCCCTGCTGCTTCACGGCGTGGTGGCGGC
CCTGGTGCTGTTGGTTCCCTGGCCGCTGAGCTATACCCCGATCTGGCTGCTGCTGCTGTCGCTGGTGGTCTTCGACTGCG
TGCGCAGCCAGCGGCGGATCCATGCCCGTCGCGGGGAGATAAAACTGCTCACCGATTCCCGTCTTCGCTGGCAAAACGCC
GAATGGGAGATCCTCGGGACGCCGTGGGTTATCAATAGCGGTATGCTGCTGCGTTTGCGCCATGTCGATACCCGGCGCGG
ACAGCATCTTTGGCTGGCGGCGGACAGCATGGACGCCGGAGAGTGGCGCGATCTGCGCCGGCTGGTGCTGCAAAAACCGG
CGCAGGAGTAA

Antitoxin


Download         Length: 200 a.a.        Molecular weight: 22286.14 Da        Isoelectric Point: 4.7588

>AT196504 WP_053025425.1 NZ_CP071512:957682-958281 [Staphylococcus haemolyticus]
MAMNFKVFNDVEHVAEYTADIIRKQFNNNPTTIAGIHLTKDAAPVLDELKKDVDHNAVDFSQVNILDYDDNRSYYEALGV
PTSQIYPINLDDDAESLIDDKIKTKENKGKLILQVTSIDESGSLNVNVRQGLLKAREVVLVVTGANKREVVKKLYEENGK
SSFEPADLKAHRMVTVVLDRAAAEGLPEDVKEYFTARFA

Download         Length: 600 bp

>AT196504 NZ_CP095145:799377-799643 [Klebsiella pneumoniae]
ATGGGCATTAACAATAAAGCACGTATCCACTGGGCATGCCGCCGCGGGATGCGCGAACTCGACATCTCCATCATGCCGTT
CTTTGAGTATGAGTACGATACCCTCAGCGACGCTGACAAACAGCTGTTCATTCGCCTGCTGGAAAATGACGATCCGGATC
TGTTCAACTGGCTGATGAACCACGGCAAACCGGCCGATGCGGAGCTGCAGCGGATGGTAACCTTAATTCAGACACGGAAT
CGGGAACGTGGTCCTGTGGCAATCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References