Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mbcAT/RES-TIGR02293 |
Location | 2232735..2233633 | Replicon | chromosome |
Accession | NZ_CP071127 | ||
Organism | Mycobacterium tuberculosis strain 120/26CAO |
Toxin (Protein)
Gene name | mbcT | Uniprot ID | P64908 |
Locus tag | JY387_RS10360 | Protein ID | WP_003410001.1 |
Coordinates | 2232735..2233295 (-) | Length | 187 a.a. |
Antitoxin (Protein)
Gene name | mbcA | Uniprot ID | P64910 |
Locus tag | JY387_RS10365 | Protein ID | WP_003410003.1 |
Coordinates | 2233292..2233633 (-) | Length | 114 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JY387_RS10330 | 2227904..2228557 | - | 654 | WP_003409976.1 | cutinase Cfp21 | - |
JY387_RS10335 | 2228672..2228902 | + | 231 | WP_003409980.1 | DUF167 domain-containing protein | - |
JY387_RS10340 | 2228987..2229898 | - | 912 | WP_003409986.1 | ArgP/LysG family DNA-binding transcriptional regulator | - |
JY387_RS10345 | 2230007..2230606 | + | 600 | WP_206280157.1 | L-lysine exporter | - |
JY387_RS10350 | 2231022..2231450 | + | 429 | WP_003409992.1 | cellulose-binding protein | - |
JY387_RS10355 | 2231676..2232215 | + | 540 | WP_003900446.1 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37) | - |
JY387_RS10360 | 2232735..2233295 | - | 561 | WP_003410001.1 | RES family NAD+ phosphorylase | Toxin |
JY387_RS10365 | 2233292..2233633 | - | 342 | WP_003410003.1 | DUF2384 domain-containing protein | Antitoxin |
JY387_RS10370 | 2233719..2233976 | + | 258 | WP_003410006.1 | hypothetical protein | - |
JY387_RS10375 | 2233877..2234212 | - | 336 | WP_003410009.1 | dehydrogenase | - |
JY387_RS10380 | 2234301..2234645 | - | 345 | WP_003410010.1 | type II toxin-antitoxin system toxin endoribonuclease MazF6 | - |
JY387_RS10385 | 2234639..2234887 | - | 249 | WP_003410014.1 | ribbon-helix-helix protein, CopG family | - |
JY387_RS10390 | 2234987..2237302 | - | 2316 | WP_206337880.1 | cadmium-translocating P-type ATPase | - |
JY387_RS10395 | 2237299..2237571 | - | 273 | WP_206280159.1 | DUF1490 family protein | - |
JY387_RS10400 | 2237624..2237980 | - | 357 | WP_003410018.1 | Cd(II)/Pb(II)-sensing metalloregulatory transcriptional regulator CmtR | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 187 a.a. Molecular weight: 20248.70 Da Isoelectric Point: 4.5091
>T195363 WP_003410001.1 NZ_CP071127:c2233295-2232735 [Mycobacterium tuberculosis]
VSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTT
AEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDIYGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQ
RTRPGQLQLRQSVDLTPALYQELRAT
VSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTT
AEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDIYGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQ
RTRPGQLQLRQSVDLTPALYQELRAT
Download Length: 561 bp
>T195363 NZ_CP094663:c1493735-1493559 [Staphylococcus aureus]
TTGGATAGATGGTGGCTATCTGAGTATAAGGAGGTGGTGCCTATGGTGGCATTACTGAAATCTTTAGAAAGGAGACGCCT
AATGATTACAATTAGTACCATGTTGCAGTTTGGTTTATTCCTTATTGCATTGATAGGTCTAGTAATCAAGCTTATTGAAT
TAAGCAATAAAAAATAA
TTGGATAGATGGTGGCTATCTGAGTATAAGGAGGTGGTGCCTATGGTGGCATTACTGAAATCTTTAGAAAGGAGACGCCT
AATGATTACAATTAGTACCATGTTGCAGTTTGGTTTATTCCTTATTGCATTGATAGGTCTAGTAATCAAGCTTATTGAAT
TAAGCAATAAAAAATAA
Antitoxin
Download Length: 114 a.a. Molecular weight: 12488.33 Da Isoelectric Point: 4.8359
>AT195363 WP_003410003.1 NZ_CP071127:c2233633-2233292 [Mycobacterium tuberculosis]
MGVNVLASTVSGAIERLGLTYEEVGDIVDASPRSVARWTAGQVVPQRLNKQRLIELAYVADALAEVLPRDQANVWMFSPN
RLLEHRKPADLVRDGEYQRVLALIDAMAEGVFV
MGVNVLASTVSGAIERLGLTYEEVGDIVDASPRSVARWTAGQVVPQRLNKQRLIELAYVADALAEVLPRDQANVWMFSPN
RLLEHRKPADLVRDGEYQRVLALIDAMAEGVFV
Download Length: 342 bp
>AT195363 NZ_CP094663:1493436-1493491 [Staphylococcus aureus]
AAAAAGGGCAACATGCGCAAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTG
AAAAAGGGCAACATGCGCAAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTG
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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