Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 4794100..4794616 Replicon chromosome
Accession NZ_CP070449
Organism Klebsiella pneumoniae strain B18064

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag JT745_RS23400 Protein ID WP_040216106.1
Coordinates 4794100..4794384 (-) Length 95 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag JT745_RS23405 Protein ID WP_064162488.1
Coordinates 4794374..4794616 (-) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JT745_RS23375 4789517..4789825 - 309 WP_012737232.1 PTS sugar transporter subunit IIB -
JT745_RS23380 4789910..4790083 + 174 WP_032425422.1 hypothetical protein -
JT745_RS23385 4790086..4790829 + 744 WP_002886905.1 MurR/RpiR family transcriptional regulator -
JT745_RS23390 4791186..4793324 + 2139 WP_004186701.1 anaerobic ribonucleoside-triphosphate reductase -
JT745_RS23395 4793632..4794096 + 465 WP_064162487.1 anaerobic ribonucleoside-triphosphate reductase-activating protein -
JT745_RS23400 4794100..4794384 - 285 WP_040216106.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
JT745_RS23405 4794374..4794616 - 243 WP_064162488.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
JT745_RS23410 4794694..4796604 - 1911 WP_023325426.1 BglG family transcription antiterminator -
JT745_RS23415 4796627..4797781 - 1155 WP_064162489.1 lactonase family protein -
JT745_RS23420 4797848..4798588 - 741 WP_002886899.1 KDGP aldolase family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(7-83)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-69)


Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 11097.94 Da        Isoelectric Point: 10.4962

>T194068 WP_040216106.1 NZ_CP070449:c4794384-4794100 [Klebsiella pneumoniae]
MTYELAFDPRAWREWQKPGETVKKQFKNKLQQIVQNPRIESTRLSDLPDCYKIKLKASGYRLVYQVRDSVVVVYVIAIGK
REKAAVYHQANKRL

Download         Length: 285 bp

>T194068 NZ_CP093340:2455535-2456023 [Luteimonas sp. S4-F44]
GTGACCGGGGCCCGTCACCGGGTGGCGGAACGCGCGCCCGGCTGGCCACCAGGCGCGCCGGTCCACCTGCTCGACGTCAA
TGTGCTGCTGGCGTTGCTCGATCCTCTCCACGCACACCACGACCGCGCCCACGATTGGTTCGCGCAGGAAGGCGCACGAG
GCTGGGCCTCGTGCCCGATCACCCAGAACGGTGCGCTGCGGATCATGTCCAACCCGCGCTATTCCAACCCGGCCGAGTCG
GTCACCGAGGCCGCGCAGGTGCTGGCCGGCCTGTGCGCGCATCCGGGGCATCGGTTCTGGCCCGATGCACTGAGCCTGCT
CGACGCAACGCACGTCGCGCACGACCGGCTATTGACCTCGGGCCAGGTCACCGATACCTATCTGCTGGCGCTCGCTGTGC
AGATGGGCGGTCGCCTGGCCAGCTTCGATCGCCGCTTGGTGGTCGACGCGGTCCGCGGTGGTGCACAGGCGCTGCACCTG
TTGCCCTAA

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9059.57 Da        Isoelectric Point: 6.3340

>AT194068 WP_064162488.1 NZ_CP070449:c4794616-4794374 [Klebsiella pneumoniae]
MATLNVRLDDKLKKEAYAVLEKLDMTPTEAVRLLFQYIAENGRMPLKSMTISDGEAALLRTVRERLENPRPGVKVSLDDL

Download         Length: 243 bp

>AT194068 NZ_CP093340:2455308-2455538 [Luteimonas sp. S4-F44]
ATGCGCACGACTCTTTCGCTCGACGACGATGTCCTCGCCGCGGCCCGCGCGTTGGCCCAGGCGCAAGGCCGAAGCCTCGG
TGAGGTGGTGTCCGACTTGGTCCGCAAGGGTCTGACGCCGGCCACGCCGCCACCGCGTTATCGCAACGGGATTCCGCTGC
TGCCGGCCCGGCCCGGCGCCGAGCGGGCGACGCTCGAGCTGGTGAACCGGCTGCGCGACGAGGCCCCGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References