Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) kacAT/DUF1778(antitoxin)
Location 4653258..4654068 Replicon chromosome
Accession NZ_CP070445
Organism Klebsiella pneumoniae strain B12097

Toxin (Protein)


Gene name KacT Uniprot ID A0A060VJ83
Locus tag JT744_RS22770 Protein ID WP_004178461.1
Coordinates 4653258..4653791 (-) Length 178 a.a.

Antitoxin (Protein)


Gene name KacA Uniprot ID J2E9Q7
Locus tag JT744_RS22775 Protein ID WP_002887278.1
Coordinates 4653802..4654068 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JT744_RS22765 4652089..4653210 + 1122 WP_004214138.1 cupin domain-containing protein -
JT744_RS22770 4653258..4653791 - 534 WP_004178461.1 GNAT family N-acetyltransferase Toxin
JT744_RS22775 4653802..4654068 - 267 WP_002887278.1 DUF1778 domain-containing protein Antitoxin
JT744_RS22780 4654171..4655604 - 1434 WP_064162551.1 Cu(+)/Ag(+) sensor histidine kinase -
JT744_RS22785 4655594..4656277 - 684 WP_002887273.1 copper response regulator transcription factor CusR -
JT744_RS22790 4656449..4657834 + 1386 WP_064162550.1 efflux transporter outer membrane subunit -
JT744_RS22795 4657852..4658196 + 345 WP_064162549.1 cation efflux system protein CusF -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(91-151)

Antitoxin

Vibrio phage ICP1, Orf50

(2-86)


Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 19810.65 Da        Isoelectric Point: 5.2614

>T194051 WP_004178461.1 NZ_CP070445:c4653791-4653258 [Klebsiella pneumoniae]
MEQQLTIEMIADAFSYDITGFDCGEEALNTFLKEHLKRQHDGQILRGYALVSGDTVPRLLGYYTLSGSCFERGMLPSKTQ
QKKIPYQNAPSVTLGRLAIDKSVQGQGWGEMLVAHAMRVVWGASKAVGIYGLFVEALNEKAKAFYLRLGFIQLVDENSNL
LFYPTKSIEQLFTDDES

Download         Length: 534 bp

>T194051 NZ_CP093333:1864183-1864371 [Pseudomonas simiae]
GTGCAAAGCAGGTTATTGATCAAAGAACTGCAAGAGGCGGGTTGGGTGTTGGACCGGGTCGCGGGCAGTCATCATATTTT
TACTCACCGCTATAACCCGTACACCATTCCGGTACCCCACCCAAAAAAGGACCTGCCGCTGGGCACTGTCAAAAGCATCA
GGAAACGCGCCGGCTTGTTTCAGTTTTAA

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9996.46 Da        Isoelectric Point: 10.1757

>AT194051 WP_002887278.1 NZ_CP070445:c4654068-4653802 [Klebsiella pneumoniae]
MPALKKQRIDLRLTDDDKSIIEEAAAISNQTITQFVVASASERAAEVIEQHRRMVLNEQSWSLVMEAITQPPAPNDRLKR
AAKRLQTR

Download         Length: 267 bp

>AT194051 NZ_CP093333:1864383-1864787 [Pseudomonas simiae]
ATGCAATACCCAATCTGTATCGAATGGGGCGATGACTTCACCGCCACCGGTATTCAGATCCCCGACATCCCTGGCGCAGT
CACCGCTGGGGACAGTTTTGAGGAGGCCTATAACGCTGCGGTGGAAGTCGCCCACATCATGCTGCAAGAGATTGCCGCAG
AGGGTGGACCGATTCCCCTGCCAACGTCGGTGGCCAACCATCATGCGCACGAAGATTACGCCGGCATGGGCTGGGGGATG
TTGGAGTTGGACATCTCGCCCTACCTGGGCAAGACCGAGAAGGTCAATGTGACCTTGCCCGGTTATGTCATCCAGCGCAT
CGACCGTTATGTGCGTGAGCACAAGGTCAAGAGTCGCTCTTCCTTTCTGGCGGATGCCGCGCTGGAGAAGCTGGTGCGGT
CCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A060VJ83

Antitoxin

Source ID Structure
PDB 5ZGN
AlphaFold DB A0A0H3GLZ1

References