Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relE-yefM/YoeB-RelB
Location 1684717..1685234 Replicon chromosome
Accession NZ_CP070228
Organism Arcanobacterium phocisimile strain DSM 26142

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag JTE88_RS07640 Protein ID WP_204424073.1
Coordinates 1684717..1684971 (-) Length 85 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag JTE88_RS07645 Protein ID WP_204424075.1
Coordinates 1684977..1685234 (-) Length 86 a.a.

Genomic Context

JTE88_RS07655JTE88_RS07620JTE88_RS07625JTE88_RS07630JTE88_RS07635JTE88_RS07640JTE88_RS07645JTE88_RS07650JTE88_RS07660
Location: 1686814..1688046 (1233 bp)
Type: Others
Protein ID: WP_204424079.1
Location: 1681700..1682242 (543 bp)
Type: Others
Protein ID: WP_204424067.1
Location: 1682298..1682738 (441 bp)
Type: Others
Protein ID: WP_204424068.1
Location: 1682897..1683637 (741 bp)
Type: Others
Protein ID: WP_204424070.1
Location: 1684171..1684707 (537 bp)
Type: Others
Protein ID: WP_204424071.1
Location: 1684717..1684971 (255 bp)
Type: Toxin
Protein ID: WP_204424073.1
Location: 1684977..1685234 (258 bp)
Type: Antitoxin
Protein ID: WP_204424075.1
Location: 1685597..1686676 (1080 bp)
Type: Others
Protein ID: WP_204424077.1
Location: 1688126..1689340 (1215 bp)
Type: Others
Protein ID: WP_204424080.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
JTE88_RS076201681700..1682242-543WP_204424067.1GNAT family N-acetyltransferase-
JTE88_RS076251682298..1682738-441WP_204424068.1GNAT family N-acetyltransferase-
JTE88_RS076301682897..1683637-741WP_204424070.1hypothetical protein-
JTE88_RS076351684171..1684707-537WP_204424071.1GNAT family N-acetyltransferase-
JTE88_RS076401684717..1684971-255WP_204424073.1Txe/YoeB family addiction module toxinToxin
JTE88_RS076451684977..1685234-258WP_204424075.1type II toxin-antitoxin system prevent-host-death family antitoxinAntitoxin
JTE88_RS076501685597..1686676-1080WP_204424077.1redox-regulated ATPase YchF-
JTE88_RS076551686814..1688046+1233WP_204424079.1DNA recombination protein RmuC-
JTE88_RS076601688126..1689340-1215WP_204424080.14-hydroxy-3-methylbut-2-enyl diphosphate reductase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 10296.72 Da        Isoelectric Point: 9.2037

>T193539 WP_204424073.1 NZ_CP070228:c1684971-1684717 [Arcanobacterium phocisimile]
VKYVWDENAWQDYLWWQAHDRKMLKRINLLLKDISRNGNEGIGKPEPLKYELAGYWSRRISDEHRLVYKYTETAVYIAAC
RYHY

Download         Length: 255 bp

>T193539 NZ_CP093021:1844118-1844705 [Pseudomonas aeruginosa]
ATGTCGAGGAGGGCGCCCATGTTCAAGCCGCTACCGATCACCCTGCAGCGCGGAGCCTTGCGTCTCGAGCCGCTGGTGGA
AGCGGACATTCCCGAGCTGGTGAGCCTCGCCGAAGCCAACCGCGAGGCGCTGCAGTACATGGACGGACCGACGCGGCCGG
ACTGGTATCGCCAGAGCCTCGCCGAGCAGCGCGAGGGCAGGGCGTTGCCGCTCGCCGTCCGCCTCGGCGTGCAACTGGTC
GGGACCACGCGCTTCGCCGAATTCCTTCCCGCCTTGCCGGCCTGCGAGATCGGTTGGACCTGGCTCGACCAGGCCCAGCA
CGGCAGCGGTCTGAACCGCATGATCAAGTACCTGATGCTCAAGCATGCCTTCGACAACCTGCGCATGGTCCGCGTGCAGC
TCAGCACGGCGGCGAGCAACCTGCGCGCCCAGGGCGCCATCGACAAGCTCGGCGCGCAGCGCGAGGGCGTGCTGCGCAAC
CACCGGCGGCTGGCCGGCGGGCGGCTTGACGACACCTTCGTCTACAGCATCACCGACCACGAATGGCCGCAGGTCAAGGC
GGCGCTGGAAGCCAGCTTCACCGGCTGA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 9649.81 Da        Isoelectric Point: 4.6677

>AT193539 WP_204424075.1 NZ_CP070228:c1685234-1684977 [Arcanobacterium phocisimile]
MKTMSYSESRANYADVLKSVVEDREEVIITRKGHDSAVIVSLDDYNSLRETAYLMRSPRNARRLFDAVDRLEAGEGTVQP
LLEAE

Download         Length: 258 bp

>AT193539 NZ_CP093021:1844772-1845626 [Pseudomonas aeruginosa]
GTGCCGGACGAGACGAGCGGAGAACACACGCATTTCTGGCGCGCCGCCGAACTGGGCGGCGTCGAGCTGCTGCATGCGCG
TTATGTGGAGCAGCGTTTCGCGCCGCATGTGCACAGCAGCTTCGCCCTGGTCATCATCGAACAGGGCGCGCAGCGCTTCC
GCCATCGTGGCGGCGAGCACCTGGCCCCGCTGGGCAGCATGGTGCTGATCAACCCCGACGAAGTGCACACCGGCTCCAAG
GCCCATGACGCCGGTTGGCTCTATCGCGGCTACTACCCGGAGATGGAGCAGATCGACGGGATTCTCGACGAGCTGGAAAT
CCATCATGGCGGCGTGCCGCGTTTCGCCGACAGCGTGATCCACGACCAACCCCTGGCACGCGCCTTCGTCCACTTGCACC
GCCTGCTGGCCGAGCATGCCGGCAGCCTGGAGACCCAGACCCGCTGGCGCGAGACGGTGCTCGCCCTGTTCCGTCGCCAT
GCCCGCCTACCAGAGGCGCCGAAGGCCGGGCAGGAGCCGTTGGCGGTGGCCCGTGCCCGCGAACTGCTGGCGGCGCGGTT
GCTCGACCCGCCTTCACTGGAGGAATTGGCGGCGGCGGTCAACCTGTCCCCGTTCCATTTTGCCCGGGTCTTCCGTCGCG
CCACCGGCATGCCGCCCCACGCCTGGCTCAGGCAGCGCCGCCTGGAGCAGGCCAGGGCACTGCTCAAGAGCGGCCGGGCG
CCGCTGGAGGTGGCCCTGGAGCTGGGCTTCGCCGACCAGAGCCACCTCGGTCGCCAGTTCAAGCAGGCCTACGGCGTGGC
ACCGGGTGAATACCGCTCGGCCTGCGCGCGCTCGTCCTTGACGACATACGAATAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References