Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mosAT/AbiEii-AbiEi |
| Location | 1884089..1885770 | Replicon | chromosome |
| Accession | NZ_CP069961 | ||
| Organism | Klebsiella pneumoniae strain FDAARGOS_1317 | ||
Toxin (Protein)
| Gene name | mosT | Uniprot ID | J2XCI1 |
| Locus tag | I6K47_RS09185 | Protein ID | WP_004146663.1 |
| Coordinates | 1884089..1885006 (-) | Length | 306 a.a. |
Antitoxin (Protein)
| Gene name | mosA | Uniprot ID | A6TH05 |
| Locus tag | I6K47_RS09190 | Protein ID | WP_004177809.1 |
| Coordinates | 1885012..1885770 (-) | Length | 253 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K47_RS09165 | 1879395..1880915 | + | 1521 | WP_204779856.1 | ATP-binding cassette domain-containing protein | - |
| I6K47_RS09170 | 1880912..1881910 | + | 999 | WP_002885172.1 | ribose ABC transporter permease | - |
| I6K47_RS09175 | 1881941..1882882 | + | 942 | WP_002885156.1 | ABC transporter substrate-binding protein | - |
| I6K47_RS09180 | 1882957..1883964 | + | 1008 | WP_004177805.1 | carbohydrate kinase family protein | - |
| I6K47_RS09185 | 1884089..1885006 | - | 918 | WP_004146663.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
| I6K47_RS09190 | 1885012..1885770 | - | 759 | WP_004177809.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin |
| I6K47_RS09195 | 1885856..1886584 | - | 729 | WP_004177810.1 | response regulator transcription factor | - |
| I6K47_RS09200 | 1886857..1889004 | + | 2148 | WP_012737173.1 | formate dehydrogenase H subunit alpha, selenocysteine-containing | - |
| I6K47_RS09205 | 1889350..1890036 | + | 687 | WP_004151733.1 | sel1 repeat family protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 306 a.a. Molecular weight: 34659.10 Da Isoelectric Point: 5.4707
>T192325 WP_004146663.1 NZ_CP069961:c1885006-1884089 [Klebsiella pneumoniae]
MDIQAPYYRQVALLMQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRAIALPHIRDALARIAANLQQQ
AGMSAVLQANRSDEMRVIVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVFGYASLPVVSLPDLYGGKLCAALDRQH
PRDFYDVKLLLDAQELDRPIFNGFIAYLLSHNRPLAEVLNPRWKDIAEPFYREFSGMTFETIALEELTAVPNRMIAALKS
CFTQQDVDFLLSFKRGEPDWRLAPEMRIQDLPAVQWKLRNIHQMPAIKRAESLDKLEKVLAEWRS
MDIQAPYYRQVALLMQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRAIALPHIRDALARIAANLQQQ
AGMSAVLQANRSDEMRVIVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVFGYASLPVVSLPDLYGGKLCAALDRQH
PRDFYDVKLLLDAQELDRPIFNGFIAYLLSHNRPLAEVLNPRWKDIAEPFYREFSGMTFETIALEELTAVPNRMIAALKS
CFTQQDVDFLLSFKRGEPDWRLAPEMRIQDLPAVQWKLRNIHQMPAIKRAESLDKLEKVLAEWRS
Download Length: 918 bp
>T192325 NZ_CP092289:c1049996-1049742 [Marinobacter sp. M1C]
CTGGAACGATGCCGCAAATTCTTAGCCGCCAAAGCCCCGGAAGCCAGTAGGCGGGCAGGACAAACCATCGAACGGCACTT
CCTGTTTTTGGAAACAGCCACGGGTATTGGCCGGCCGTTCGCTGAAATGCCTGAATTGCGCGAATTAGTTATTGCCTTCG
GGAACTCCGGGTATGTGGCCCTGTACCACCATGAACCGGCCGACGATGCAGTATATGTTCTGGCCTTCCGGCACCAAAAA
GAAGCGGGCTTTTGA
CTGGAACGATGCCGCAAATTCTTAGCCGCCAAAGCCCCGGAAGCCAGTAGGCGGGCAGGACAAACCATCGAACGGCACTT
CCTGTTTTTGGAAACAGCCACGGGTATTGGCCGGCCGTTCGCTGAAATGCCTGAATTGCGCGAATTAGTTATTGCCTTCG
GGAACTCCGGGTATGTGGCCCTGTACCACCATGAACCGGCCGACGATGCAGTATATGTTCTGGCCTTCCGGCACCAAAAA
GAAGCGGGCTTTTGA
Antitoxin
Download Length: 253 a.a. Molecular weight: 28548.92 Da Isoelectric Point: 10.0870
>AT192325 WP_004177809.1 NZ_CP069961:c1885770-1885012 [Klebsiella pneumoniae]
MATKLNWLLQNSAPGDVILQSWLSQHAISPSLAFKYAQSGWLKKRGNGVYARAGREPEWNDALACLQNQLAAPVYVAGLS
SLVWQGRSHYLQLKQNQCWLSVENKALLPKWFREFPGVEWIVISGKKLPVLDDRYRVTLDIKGKKLIGSAPELAAYELLS
AVPGTLSFNHAAELFQGLVNLNPRKVEYLLSVSQSVQAKRLYLFFASFYEHGWLKRIDSQKIDLGAGKRQIVENGKFNAQ
YQITVPERFQKE
MATKLNWLLQNSAPGDVILQSWLSQHAISPSLAFKYAQSGWLKKRGNGVYARAGREPEWNDALACLQNQLAAPVYVAGLS
SLVWQGRSHYLQLKQNQCWLSVENKALLPKWFREFPGVEWIVISGKKLPVLDDRYRVTLDIKGKKLIGSAPELAAYELLS
AVPGTLSFNHAAELFQGLVNLNPRKVEYLLSVSQSVQAKRLYLFFASFYEHGWLKRIDSQKIDLGAGKRQIVENGKFNAQ
YQITVPERFQKE
Download Length: 759 bp
>AT192325 NZ_CP092289:c1050295-1050023 [Marinobacter sp. M1C]
ATGGCAACATCTCTCAAAATCGACAACACACTAAAAAGCCGCGTTCATCACATCGCCAACCAACGCCGCCGCTCTCCGCA
CTGGATCATGCTGGAAGCCATACAGCAGTACGTTGAGCGCGAGGAAGCACGCGAGAGTTTCAAGCAGGAGGCCTTAGCGT
CTTGGTCAGCCTACAAGGAAACCGGCAGACACCTGACCGGCCAAGAAGCTCGCGCCTGGTTGAATACTTGGGGCAACGAT
GATGAGAAGGCGGCGCCAGAGTGCCACGAGTAA
ATGGCAACATCTCTCAAAATCGACAACACACTAAAAAGCCGCGTTCATCACATCGCCAACCAACGCCGCCGCTCTCCGCA
CTGGATCATGCTGGAAGCCATACAGCAGTACGTTGAGCGCGAGGAAGCACGCGAGAGTTTCAAGCAGGAGGCCTTAGCGT
CTTGGTCAGCCTACAAGGAAACCGGCAGACACCTGACCGGCCAAGAAGCTCGCGCCTGGTTGAATACTTGGGGCAACGAT
GATGAGAAGGCGGCGCCAGAGTGCCACGAGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|