Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mosAT/AbiEii-AbiEi |
Location | 2144284..2145973 | Replicon | chromosome |
Accession | NZ_CP069957 | ||
Organism | Escherichia coli strain FDAARGOS_1279 |
Toxin (Protein)
Gene name | mosT | Uniprot ID | A0A829L165 |
Locus tag | I6K09_RS10380 | Protein ID | WP_001521912.1 |
Coordinates | 2144284..2145204 (-) | Length | 307 a.a. |
Antitoxin (Protein)
Gene name | mosA | Uniprot ID | - |
Locus tag | I6K09_RS10385 | Protein ID | WP_001521911.1 |
Coordinates | 2145191..2145973 (-) | Length | 261 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
I6K09_RS10365 (2140374) | 2140374..2141501 | - | 1128 | WP_001521913.1 | MFS transporter | - |
I6K09_RS10370 (2141643) | 2141643..2142701 | - | 1059 | WP_122452191.1 | alpha/beta hydrolase | - |
I6K09_RS10375 (2142966) | 2142966..2143850 | + | 885 | WP_001119037.1 | LysR family transcriptional regulator | - |
I6K09_RS10380 (2144284) | 2144284..2145204 | - | 921 | WP_001521912.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
I6K09_RS10385 (2145191) | 2145191..2145973 | - | 783 | WP_001521911.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin |
I6K09_RS10390 (2146289) | 2146289..2149498 | + | 3210 | WP_048237838.1 | RNA-directed DNA polymerase | - |
I6K09_RS10400 (2149845) | 2149845..2150315 | + | 471 | WP_000201185.1 | hypothetical protein | - |
I6K09_RS10405 (2150312) | 2150312..2150414 | + | 103 | Protein_2057 | helix-turn-helix domain-containing protein | - |
I6K09_RS10410 (2150506) | 2150506..2150664 | + | 159 | Protein_2058 | integrase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 307 a.a. Molecular weight: 34601.04 Da Isoelectric Point: 7.2649
>T192295 WP_001521912.1 NZ_CP069957:c2145204-2144284 [Escherichia coli]
MDLRDSYARQVKLLMAALPYVAKESCFALKGGTAINLFVQDFPRLSVDIDLAYKSFADRDTDLAAINDALKRITASLNGR
PGITAIRQENKADEKRIIVNTADAKIKIEVSPVWRGLLLPPAEMPVCERVEMEYGFTTMSVVSLADLYGGKICAALDRQH
PRDLFDVLNMLEKPGLMREIFDGFLCYLAGHPRPIAELLAPNWDTERITTLYAQEFSGMTQQETSLESLLSVTTLLPQAL
KSHLTDLDREFLLSFKQNSPDWSRYRYPEIQHLPAIRWKQRNLAVLKDKNPAKYVAAVNKLERVLA
MDLRDSYARQVKLLMAALPYVAKESCFALKGGTAINLFVQDFPRLSVDIDLAYKSFADRDTDLAAINDALKRITASLNGR
PGITAIRQENKADEKRIIVNTADAKIKIEVSPVWRGLLLPPAEMPVCERVEMEYGFTTMSVVSLADLYGGKICAALDRQH
PRDLFDVLNMLEKPGLMREIFDGFLCYLAGHPRPIAELLAPNWDTERITTLYAQEFSGMTQQETSLESLLSVTTLLPQAL
KSHLTDLDREFLLSFKQNSPDWSRYRYPEIQHLPAIRWKQRNLAVLKDKNPAKYVAAVNKLERVLA
Download Length: 921 bp
>T192295 NZ_CP092284:c2613008-2612745 [Marinobacter sp. M3C]
GTGACATGGAAGTTGGTTTACACCAAACAGGCCCAAAAAGATGCAAAAAAGTTAGCTGCCAGCAGCCTCAAGCCAAAAGC
TCAGGGATTGTTGGCGCTGATTGCGGAAGATCCGTATCGGAGGCCGCCGCCGTTCGAAAAGCTCATTGGTGATCTTGCAG
GAGCATACTCTCGCCGCATCAATATCCAGCATCGTGTTGTTTACGAAGTGCTCGAAGATGAACGAGTGGTAAAAGTTCTC
CGGCTCTGGAGTCACTACGAATAA
GTGACATGGAAGTTGGTTTACACCAAACAGGCCCAAAAAGATGCAAAAAAGTTAGCTGCCAGCAGCCTCAAGCCAAAAGC
TCAGGGATTGTTGGCGCTGATTGCGGAAGATCCGTATCGGAGGCCGCCGCCGTTCGAAAAGCTCATTGGTGATCTTGCAG
GAGCATACTCTCGCCGCATCAATATCCAGCATCGTGTTGTTTACGAAGTGCTCGAAGATGAACGAGTGGTAAAAGTTCTC
CGGCTCTGGAGTCACTACGAATAA
Antitoxin
Download Length: 261 a.a. Molecular weight: 29168.46 Da Isoelectric Point: 8.4458
>AT192295 WP_001521911.1 NZ_CP069957:c2145973-2145191 [Escherichia coli]
MPNYLNWLMQHTLPGQVLLQSWLTRNGIDRKLSYLYVKNGWLRRIAHGVYCRTGREPDWVDAVYCLQSQWEKPVRVAGLT
SLALQGHAHYTEQGKPQVWLALPAYVKLPGWFSAFEQSATFVTLYTSGLTADVTPFTTELKIGDRQLAGSVPELVAYEIA
CGVPSLISFEHADALFQGMNLLSPRKLQALLCASHSVKTNRVMLYLARRNGHPYFQFIDQSGIETGTGKRQIIPGGWLEP
DYQITVPRAFKPEGVEDGSA
MPNYLNWLMQHTLPGQVLLQSWLTRNGIDRKLSYLYVKNGWLRRIAHGVYCRTGREPDWVDAVYCLQSQWEKPVRVAGLT
SLALQGHAHYTEQGKPQVWLALPAYVKLPGWFSAFEQSATFVTLYTSGLTADVTPFTTELKIGDRQLAGSVPELVAYEIA
CGVPSLISFEHADALFQGMNLLSPRKLQALLCASHSVKTNRVMLYLARRNGHPYFQFIDQSGIETGTGKRQIIPGGWLEP
DYQITVPRAFKPEGVEDGSA
Download Length: 783 bp
>AT192295 NZ_CP092284:c2613247-2613005 [Marinobacter sp. M3C]
ATGACCGGAATTACGGCAACTGAGGCGCGCAGCAACCTTTACAGGTTGATTGACGAAACGGCCGAGTCCCATCAACCAAT
CGTTATTATGGGTAAACGGAACAGGGCTGTTCTCGTTTCCGAGGAAGATTGGTCTGCGATTCAGGAAACGCTTTACCTGT
TATCTGTACCAGGTATGCGCGAGTCTATTCGAGAGGGAATGGAGACCCCTATGGATCAATGCGATGAGGAGCTGAACTGG
TGA
ATGACCGGAATTACGGCAACTGAGGCGCGCAGCAACCTTTACAGGTTGATTGACGAAACGGCCGAGTCCCATCAACCAAT
CGTTATTATGGGTAAACGGAACAGGGCTGTTCTCGTTTCCGAGGAAGATTGGTCTGCGATTCAGGAAACGCTTTACCTGT
TATCTGTACCAGGTATGCGCGAGTCTATTCGAGAGGGAATGGAGACCCCTATGGATCAATGCGATGAGGAGCTGAACTGG
TGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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