Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YoeB-RelB
Location 1169481..1169995 Replicon chromosome
Accession NZ_CP069798
Organism Paralysiella testudinis strain 26B

Toxin (Protein)


Gene name relB Uniprot ID -
Locus tag JQU52_RS06020 Protein ID WP_230340230.1
Coordinates 1169481..1169744 (-) Length 88 a.a.

Antitoxin (Protein)


Gene name relE Uniprot ID -
Locus tag JQU52_RS06025 Protein ID WP_230340231.1
Coordinates 1169741..1169995 (-) Length 85 a.a.

Genomic Context

JQU52_RS05990JQU52_RS05995JQU52_RS06000JQU52_RS06005JQU52_RS06010JQU52_RS06015JQU52_RS06020JQU52_RS06025JQU52_RS06030JQU52_RS06035JQU52_RS06040JQU52_RS06045JQU52_RS06050
Location: 1165548..1166210 (663 bp)
Type: Others
Protein ID: WP_230340224.1
Location: 1166207..1166641 (435 bp)
Type: Others
Protein ID: WP_230340225.1
Location: 1166634..1167248 (615 bp)
Type: Others
Protein ID: WP_230340226.1
Location: 1167542..1167811 (270 bp)
Type: Others
Protein ID: WP_230340227.1
Location: 1167811..1168416 (606 bp)
Type: Others
Protein ID: WP_230340228.1
Location: 1168449..1169402 (954 bp)
Type: Others
Protein ID: WP_230340229.1
Location: 1169481..1169744 (264 bp)
Type: Toxin
Protein ID: WP_230340230.1
Location: 1169741..1169995 (255 bp)
Type: Antitoxin
Protein ID: WP_230340231.1
Location: 1170244..1171641 (1398 bp)
Type: Others
Protein ID: WP_230340232.1
Location: 1171745..1172272 (528 bp)
Type: Others
Protein ID: WP_230340233.1
Location: 1172441..1173166 (726 bp)
Type: Others
Protein ID: WP_230340234.1
Location: 1173163..1174323 (1161 bp)
Type: Others
Protein ID: WP_230340235.1
Location: 1174386..1174859 (474 bp)
Type: Others
Protein ID: WP_230340236.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
JQU52_RS05990 (JQU52_06020)1165548..1166210+663WP_230340224.17-cyano-7-deazaguanine synthase QueC-
JQU52_RS05995 (JQU52_06025)1166207..1166641+435WP_230340225.16-carboxytetrahydropterin synthase QueD-
JQU52_RS06000 (JQU52_06030)1166634..1167248+615WP_230340226.17-carboxy-7-deazaguanine synthase QueE-
JQU52_RS06005 (JQU52_06035)1167542..1167811+270WP_230340227.1DUF493 family protein-
JQU52_RS06010 (JQU52_06040)1167811..1168416+606WP_230340228.1lipoyl(octanoyl) transferase LipB-
JQU52_RS06015 (JQU52_06045)1168449..1169402+954WP_230340229.1lipoyl synthase-
JQU52_RS06020 (JQU52_06050)1169481..1169744-264WP_230340230.1Txe/YoeB family addiction module toxinToxin
JQU52_RS06025 (JQU52_06055)1169741..1169995-255WP_230340231.1type II toxin-antitoxin system prevent-host-death family antitoxinAntitoxin
JQU52_RS06030 (JQU52_06060)1170244..1171641-1398WP_230340232.1ethanolamine permease-
JQU52_RS06035 (JQU52_06065)1171745..1172272-528WP_230340233.1DinB family protein-
JQU52_RS06040 (JQU52_06070)1172441..1173166-726WP_230340234.1gamma-glutamyl-gamma-aminobutyrate hydrolase family protein-
JQU52_RS06045 (JQU52_06075)1173163..1174323-1161WP_230340235.1iron-containing alcohol dehydrogenase-
JQU52_RS06050 (JQU52_06080)1174386..1174859-474WP_230340236.1OsmC family protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(1-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10631.33 Da        Isoelectric Point: 10.3826

>T191802 WP_230340230.1 NZ_CP069798:c1169744-1169481 [Paralysiella testudinis]
MMLAWADDAWNDYMYWQQTDKRMLKRINMLLKGIQRQPFAGLGDPEPLKHNWSGFWSRRINKEHRLVYRVSNDRVMVAQC
RYHYGKL

Download         Length: 264 bp

>T191802 NZ_CP091913:c3391302-3391006 [Nostoc sp. UHCC 0870]
ATGGGACTTAACAGTAAGCATCAAAAAACACTGGATGACATTTTTGAAAATCCCGTTAGATCCAATATTCCTTGGAGTGA
TATTGAATCTATGCTAATTGCACTTGGTGCGGAAGTGTCAGAAGGAAGGGGGTCAAGAGTGAGAATAGCTCTTAATAGCG
TAAAGGCAACTTTTCACAGGCCACACCCGGAAAAAGAAACTAATAAAGGTGCTGTTAAATCTATGCGCCGTTTCTTAACA
GAGTCCAGGGTTAAAGAAGACACGGACACGGGAGGACTTAGTGACAATGAAATATAA

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9240.40 Da        Isoelectric Point: 5.0210

>AT191802 WP_230340231.1 NZ_CP069798:c1169995-1169741 [Paralysiella testudinis]
MDTMSYSAFRAGLAGVLDKVNDNHKPVLVTRQNGKPAVVMSLEDFQSYEETAYLMASPANAERLNRAVAQIRAGEAQQHG
MLEE

Download         Length: 255 bp

>AT191802 NZ_CP091913:c3391016-3390696 [Nostoc sp. UHCC 0870]
ATGAAATATAAAGGATATGAAGCTGTTGTGGAATTTGACGATGAAGCTGAGATTTTTCATGGCGAAGTAGTCAACCTGCG
AGATGTGATTACATTTCAGGGTGACAGCGTGAAAGAGCTAAGGCAAGCTTTCCACGACTCAGTTGATGATTATTTAGAAT
TTTGCCAAAAACGTGGCGAAGAACCTGAAAAACCATTTTCAGGTAAGCTCATGCTCAGAATTAACCCTGAATTACATAAA
ACAATTGCTATCAAAGCAAAGAAAGAGGGTCAAAGCCTTAATTCTTGGATAGAAAAATGTTTGTGTATGTATGCACCGTA
G

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References