Detailed information of TA system
Overview
TA module
| Type | IV | Classification (family/domain) | yeeUV (cbtA-cbeA)/CbtA-CbeA |
| Location | 794340..795175 | Replicon | chromosome |
| Accession | NZ_CP069657 | ||
| Organism | Escherichia coli O89m:H10 strain MIN12 | ||
Toxin (Protein)
| Gene name | yeeV | Uniprot ID | F2VI91 |
| Locus tag | JSU14_RS03825 | Protein ID | WP_000854748.1 |
| Coordinates | 794340..794717 (-) | Length | 126 a.a. |
Antitoxin (Protein)
| Gene name | yeeU | Uniprot ID | F2VI92 |
| Locus tag | JSU14_RS03830 | Protein ID | WP_001590676.1 |
| Coordinates | 794807..795175 (-) | Length | 123 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSU14_RS03790 (789405) | 789405..790004 | + | 600 | WP_001255034.1 | type II secretion system minor pseudopilin GspJ | - |
| JSU14_RS03795 (790007) | 790007..790984 | + | 978 | WP_000633209.1 | type II secretion system minor pseudopilin GspK | - |
| JSU14_RS03800 (790981) | 790981..792159 | + | 1179 | WP_000094991.1 | type II secretion system protein GspL | - |
| JSU14_RS03805 (792161) | 792161..792697 | + | 537 | WP_000942785.1 | GspM family type II secretion system protein YghD | - |
| JSU14_RS03810 (792978) | 792978..793549 | - | 572 | Protein_757 | DUF4942 domain-containing protein | - |
| JSU14_RS03815 (793646) | 793646..793843 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| JSU14_RS03820 (793855) | 793855..794343 | - | 489 | WP_000761721.1 | DUF5983 family protein | - |
| JSU14_RS03825 (794340) | 794340..794717 | - | 378 | WP_000854748.1 | TA system toxin CbtA family protein | Toxin |
| JSU14_RS03830 (794807) | 794807..795175 | - | 369 | WP_001590676.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin |
| JSU14_RS03835 (795338) | 795338..795559 | - | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| JSU14_RS03840 (795622) | 795622..796098 | - | 477 | WP_001186726.1 | RadC family protein | - |
| JSU14_RS03845 (796114) | 796114..796599 | - | 486 | WP_000849570.1 | antirestriction protein | - |
| JSU14_RS03850 (796654) | 796654..797472 | - | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| JSU14_RS03855 (797572) | 797572..797805 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| JSU14_RS03860 (797884) | 797884..798339 | - | 456 | WP_000581504.1 | IrmA family protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 126 a.a. Molecular weight: 14179.16 Da Isoelectric Point: 7.7761
>T191521 WP_000854748.1 NZ_CP069657:c794717-794340 [Escherichia coli O89m:H10]
MKTLPDTHVREASSCPSPVTIWQTLLSRLLGQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPEF
SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYQEAKR
MKTLPDTHVREASSCPSPVTIWQTLLSRLLGQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPEF
SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYQEAKR
Download Length: 378 bp
>T191521 NZ_CP091767:241492-241842 [Bacillus anthracis]
TTGATTGTAAAACGCGGCGACGTGTATTTTGCAGACCTTTCCCCAGTTGTTGGTTCTGAGCAAGGAGGTGTTCGTCCGGT
TCTTGTCATTCAAAATGACATCGGAAATCGTTTTAGTCCAACGGTGATTGTAGCGGCTATTACTGCACAGATTCAAAAAG
CGAAATTACCCACTCATGTGGAAATTGATGCGAAAAAGTACGGTTTTGAGAGAGATTCTGTTATTTTACTTGAGCAGATT
CGAACAATCGATAAGCAGCGCTTAACGGACAAAATCACTCACTTAGATGAAGTGATGATGATTCGTGTAGATGAAGCGCT
ACAAATTAGTTTAGGACTAATAGATTTTTAA
TTGATTGTAAAACGCGGCGACGTGTATTTTGCAGACCTTTCCCCAGTTGTTGGTTCTGAGCAAGGAGGTGTTCGTCCGGT
TCTTGTCATTCAAAATGACATCGGAAATCGTTTTAGTCCAACGGTGATTGTAGCGGCTATTACTGCACAGATTCAAAAAG
CGAAATTACCCACTCATGTGGAAATTGATGCGAAAAAGTACGGTTTTGAGAGAGATTCTGTTATTTTACTTGAGCAGATT
CGAACAATCGATAAGCAGCGCTTAACGGACAAAATCACTCACTTAGATGAAGTGATGATGATTCGTGTAGATGAAGCGCT
ACAAATTAGTTTAGGACTAATAGATTTTTAA
Antitoxin
Download Length: 123 a.a. Molecular weight: 13566.19 Da Isoelectric Point: 5.8786
>AT191521 WP_001590676.1 NZ_CP069657:c795175-794807 [Escherichia coli O89m:H10]
VSDTLSGTTHPDDNDDHPWWGPPCTVTPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYARGLTCEADTLGSCGYVYLAVYPTSETKK
VSDTLSGTTHPDDNDDHPWWGPPCTVTPCFGARLVQEGNRLHYLADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSG
ELNPRHQHTVTLYARGLTCEADTLGSCGYVYLAVYPTSETKK
Download Length: 369 bp
>AT191521 NZ_CP091767:241200-241487 [Bacillus anthracis]
GTGTCCGAATCAAGTGTAACTACTGAAATCGTGGTTCGGTTGCCAAAGCAAATGGTAACGGAATTGGACGGAATTGGAAA
ACAAGAGAATAAGAATCGCCATGAACTAATTTGCCAGGCAACACAACTGTTATTGCGTCAACATAAGACGAAGAAACGCT
ACCAACATGAATCAATGCGACGTGGGTACATTGAAATGGGAAAAATTAATCTTGGTATTGCATCTGAAGCTTTCTTAGCA
GAGTATGAAGCAGCTCATACAGTAGAACGCTTAGTTAGCGGGGGGTAA
GTGTCCGAATCAAGTGTAACTACTGAAATCGTGGTTCGGTTGCCAAAGCAAATGGTAACGGAATTGGACGGAATTGGAAA
ACAAGAGAATAAGAATCGCCATGAACTAATTTGCCAGGCAACACAACTGTTATTGCGTCAACATAAGACGAAGAAACGCT
ACCAACATGAATCAATGCGACGTGGGTACATTGAAATGGGAAAAATTAATCTTGGTATTGCATCTGAAGCTTTCTTAGCA
GAGTATGAAGCAGCTCATACAGTAGAACGCTTAGTTAGCGGGGGGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|