Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 2226610..2227196 Replicon chromosome
Accession NZ_CP069064
Organism Mycobacterium tuberculosis strain N1202

Toxin (Protein)


Gene name mazF Uniprot ID G0TLY3
Locus tag JN149_RS10395 Protein ID WP_003410010.1
Coordinates 2226610..2226954 (-) Length 115 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID P0CL58
Locus tag JN149_RS10400 Protein ID WP_003410014.1
Coordinates 2226948..2227196 (-) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JN149_RS10360 2222316..2222915 + 600 WP_003409989.1 L-lysine exporter -
JN149_RS10365 2223331..2223759 + 429 WP_003409992.1 cellulose-binding protein -
JN149_RS10370 2223985..2224524 + 540 WP_003900446.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(37) -
JN149_RS10375 2225044..2225604 - 561 WP_003410001.1 RES family NAD+ phosphorylase -
JN149_RS10380 2225601..2225942 - 342 WP_003410003.1 DUF2384 domain-containing protein -
JN149_RS10385 2226028..2226285 + 258 WP_003410006.1 hypothetical protein -
JN149_RS10390 2226186..2226521 - 336 WP_003410009.1 dehydrogenase -
JN149_RS10395 2226610..2226954 - 345 WP_003410010.1 type II toxin-antitoxin system toxin endoribonuclease MazF6 Toxin
JN149_RS10400 2226948..2227196 - 249 WP_003410014.1 ribbon-helix-helix protein, CopG family Antitoxin
JN149_RS10405 2227296..2229611 - 2316 WP_003899120.1 cation transporter ATPase CptG -
JN149_RS10410 2229608..2229880 - 273 WP_003410017.1 DUF1490 family protein -
JN149_RS10415 2229933..2230289 - 357 WP_003410018.1 Cd(II)/Pb(II)-sensing metalloregulatory transcriptional regulator CmtR -
JN149_RS10420 2230446..2231213 + 768 WP_003410019.1 hemerythrin domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(5-112)

Antitoxin

Ribbon-helix-helix protein, CopG

(5-38)


Sequences

Toxin        


Download         Length: 115 a.a.        Molecular weight: 12230.12 Da        Isoelectric Point: 9.8887

>T189015 WP_003410010.1 NZ_CP069064:c2226954-2226610 [Mycobacterium tuberculosis]
VVISRAEIYWADLGPPSGSQPAKRRPVLVIQSDPYNASRLATVIAAVITSNTALAAMPGNVFLPATTTRLPRDSVVNVTA
IVTLNKTDLTDRVGEVPASLMHEVDRGLRRVLDL

Download         Length: 345 bp

>T189015 NZ_CP090611:3576940-3577092 [Escherichia coli]
ATGAAGCAGCATAAGGCGATGATTGTCGCCCTGATCGTCATCTGTATCACCGCCGTAGTGGCGGCGCTGGTAACGAGAAA
AGACCTCTGTGAGGTTCACATCCGAATTGGCCAGACGGAGGTTGCTGTTTTCACGGCTTACGAATCCGAGTAA

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9290.34 Da        Isoelectric Point: 4.3757

>AT189015 WP_003410014.1 NZ_CP069064:c2227196-2226948 [Mycobacterium tuberculosis]
MKTAISLPDETFDRVSRRASELGMSRSEFFTKAAQRYLHELDAQLLTGQIDRALESIHGTDEAEALAVANAYRVLETMDD
EW

Download         Length: 249 bp

>AT189015 NZ_CP090611:c3576891-3576834 [Escherichia coli]
GTTCTGCATATAGGGGGCCTCGGGTTGATGGTAAAATATCACTCGGGGCTTTTCTCTA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 5HK3
PDB 5HK0
PDB 5HKC

Antitoxin

Source ID Structure
PDB 7WJ0
PDB 7WNR
AlphaFold DB A0A7U4FAW9

References