Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | /RES-TIGR02293 |
Location | 2480518..2481431 | Replicon | chromosome |
Accession | NZ_CP067066 | ||
Organism | Raoultella sp. XY-1 |
Toxin (Protein)
Gene name | - | Uniprot ID | A0A808Y4A8 |
Locus tag | JGY86_RS11705 | Protein ID | WP_015584188.1 |
Coordinates | 2480518..2480991 (-) | Length | 158 a.a. |
Antitoxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | JGY86_RS11710 | Protein ID | WP_032716402.1 |
Coordinates | 2480988..2481431 (-) | Length | 148 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JGY86_RS11680 | 2476560..2477168 | - | 609 | WP_069475887.1 | glutathione S-transferase family protein | - |
JGY86_RS11685 | 2477410..2478315 | + | 906 | WP_100663613.1 | LysR family transcriptional regulator | - |
JGY86_RS11690 | 2478343..2479248 | - | 906 | WP_032716407.1 | LysR family transcriptional regulator | - |
JGY86_RS11695 | 2479351..2479668 | + | 318 | WP_004862785.1 | nuclear transport factor 2 family protein | - |
JGY86_RS11700 | 2479661..2480440 | + | 780 | WP_032716405.1 | SDR family oxidoreductase | - |
JGY86_RS11705 | 2480518..2480991 | - | 474 | WP_015584188.1 | RES domain-containing protein | Toxin |
JGY86_RS11710 | 2480988..2481431 | - | 444 | WP_032716402.1 | DUF2384 domain-containing protein | Antitoxin |
JGY86_RS11715 | 2481621..2482187 | - | 567 | WP_015584190.1 | DJ-1/PfpI family protein | - |
JGY86_RS11720 | 2482585..2483367 | + | 783 | WP_032717546.1 | DUF3750 domain-containing protein | - |
JGY86_RS11725 | 2483564..2484787 | + | 1224 | WP_200382711.1 | zinc metallochaperone GTPase ZigA | - |
JGY86_RS11745 | 2485717..2486193 | - | 477 | WP_072003719.1 | acid resistance repetitive basic protein Asr | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 158 a.a. Molecular weight: 17524.82 Da Isoelectric Point: 4.8081
>T185682 WP_015584188.1 NZ_CP067066:c2480991-2480518 [Raoultella sp. XY-1]
MIFYRLVTGRYASEAWTGSGANQYGGRWNHQGHPAVYVSTSIALASLEILVHVKNEAILNQYQLYSIEIPDSEVESLDKQ
WLPDNWQENPMPVSTMDLGTGWLQSGSGLALMLPSCIIPYENNAILNPLHPAFSEALASVRQYPFTFDPRLARSTPL
MIFYRLVTGRYASEAWTGSGANQYGGRWNHQGHPAVYVSTSIALASLEILVHVKNEAILNQYQLYSIEIPDSEVESLDKQ
WLPDNWQENPMPVSTMDLGTGWLQSGSGLALMLPSCIIPYENNAILNPLHPAFSEALASVRQYPFTFDPRLARSTPL
Download Length: 474 bp
>T185682 NZ_CP088991:c4915745-4915461 [Klebsiella pneumoniae]
ATGACCTATGAACTGGAGTTTGATCCACGAGCCTGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGGCCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGCGAATAAACGGCTCTAA
ATGACCTATGAACTGGAGTTTGATCCACGAGCCTGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGGCCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGCGAATAAACGGCTCTAA
Antitoxin
Download Length: 148 a.a. Molecular weight: 16176.42 Da Isoelectric Point: 4.9405
>AT185682 WP_032716402.1 NZ_CP067066:c2481431-2480988 [Raoultella sp. XY-1]
MKTWVPAEQPADNALWRYAGLPANRGMQLIELLSMGLPVSVLDNIHEWTEMSKTDILRITGINERNVARRKSAGGTLTPG
ESERVARFVRVLDTAVDYFGSKQDAYDWLQSPVRGLGNVAPIDLIATESGALEVTDLIGRLEHGVFA
MKTWVPAEQPADNALWRYAGLPANRGMQLIELLSMGLPVSVLDNIHEWTEMSKTDILRITGINERNVARRKSAGGTLTPG
ESERVARFVRVLDTAVDYFGSKQDAYDWLQSPVRGLGNVAPIDLIATESGALEVTDLIGRLEHGVFA
Download Length: 444 bp
>AT185682 NZ_CP088991:c4915977-4915735 [Klebsiella pneumoniae]
ATGGCCACGCTCAATGTTCGACTGGACGATAAACTCAAAAAAGAGGCTTATGCCGTGCTGGAGAAACTCGATATGACACC
AACGGAGGCGGTACGCCTGCTGTTTCAATACATTGCGGAAAATGGCCGCATGCCGGTGAAAAGTATGACCATCAGTGATG
GCGAAGCGGCGTTATTACGCACCGTTCGCGAACGGCTGGAAAACCCACGGCCGGGGGTTAAGGTGAGTCTGGATGACCTA
TGA
ATGGCCACGCTCAATGTTCGACTGGACGATAAACTCAAAAAAGAGGCTTATGCCGTGCTGGAGAAACTCGATATGACACC
AACGGAGGCGGTACGCCTGCTGTTTCAATACATTGCGGAAAATGGCCGCATGCCGGTGAAAAGTATGACCATCAGTGATG
GCGAAGCGGCGTTATTACGCACCGTTCGCGAACGGCTGGAAAACCCACGGCCGGGGGTTAAGGTGAGTCTGGATGACCTA
TGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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