Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mazEF/MazF(toxin) |
| Location | 646956..647593 | Replicon | chromosome |
| Accession | NZ_CP067043 | ||
| Organism | Bacillus velezensis strain 19573-3 | ||
Toxin (Protein)
| Gene name | mazF | Uniprot ID | G4NU33 |
| Locus tag | JHX84_RS03330 | Protein ID | WP_003156187.1 |
| Coordinates | 646956..647306 (-) | Length | 117 a.a. |
Antitoxin (Protein)
| Gene name | mazE | Uniprot ID | I2HMS5 |
| Locus tag | JHX84_RS03335 | Protein ID | WP_003156188.1 |
| Coordinates | 647312..647593 (-) | Length | 94 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JHX84_RS03290 (JHX84_03290) | 641996..642598 | - | 603 | WP_003156170.1 | PP2C family serine/threonine-protein phosphatase | - |
| JHX84_RS03295 (JHX84_03295) | 642598..643386 | - | 789 | WP_003156171.1 | RNA polymerase sigma factor SigB | - |
| JHX84_RS03300 (JHX84_03300) | 643352..643834 | - | 483 | WP_161503396.1 | anti-sigma B factor RsbW | - |
| JHX84_RS03305 (JHX84_03305) | 643831..644160 | - | 330 | WP_003156176.1 | anti-sigma factor antagonist RsbV | - |
| JHX84_RS03310 (JHX84_03310) | 644224..645231 | - | 1008 | WP_003156177.1 | PP2C family protein-serine/threonine phosphatase | - |
| JHX84_RS03315 (JHX84_03315) | 645243..645644 | - | 402 | WP_003156178.1 | anti-sigma regulatory factor | - |
| JHX84_RS03320 (JHX84_03320) | 645647..646012 | - | 366 | WP_003156180.1 | RsbT antagonist protein RsbS | - |
| JHX84_RS03325 (JHX84_03325) | 646017..646838 | - | 822 | WP_003156182.1 | STAS domain-containing protein | - |
| JHX84_RS03330 (JHX84_03330) | 646956..647306 | - | 351 | WP_003156187.1 | type II toxin-antitoxin system endoribonuclease NdoA | Toxin |
| JHX84_RS03335 (JHX84_03335) | 647312..647593 | - | 282 | WP_003156188.1 | type II toxin-antitoxin system antitoxin EndoAI | Antitoxin |
| JHX84_RS03340 (JHX84_03340) | 647713..648882 | - | 1170 | WP_003156189.1 | alanine racemase | - |
| JHX84_RS03345 (JHX84_03345) | 648999..650006 | - | 1008 | WP_003156191.1 | outer membrane lipoprotein carrier protein LolA | - |
| JHX84_RS03350 (JHX84_03350) | 650171..650536 | - | 366 | WP_003156192.1 | holo-ACP synthase | - |
| JHX84_RS03355 (JHX84_03355) | 650629..651228 | + | 600 | WP_003156193.1 | rhomboid family intramembrane serine protease | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 117 a.a. Molecular weight: 12977.98 Da Isoelectric Point: 4.8781
>T185612 WP_003156187.1 NZ_CP067043:c647306-646956 [Bacillus velezensis]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF
Download Length: 351 bp
>T185612 NZ_CP088966:81150-81443 [Brucella anthropi]
ATGGAATTTAAACTCTCTGTTCTTGCGGAAGACGATATCATTGCTATCGCCGAGCAGGGTATAGCAATGTTTGGGCCTGT
GCAGGCGAAACGCTATCATGCAGAGTTGTTTAACACTCTGGATTTAATTGCAAAGAACCCACAAATGGCACGTGCACGTG
AAGAAATTTCTCCACCTGTGCGGGTGCACCCGTTTAAAGCCCACCTCATTATTTATCAAATTGAAGCAGACGGAACAGTT
TTTGTAATTCGGGTACGTCATGCATTTGAAGATTGGGTCAGGGATCCGTTTTAA
ATGGAATTTAAACTCTCTGTTCTTGCGGAAGACGATATCATTGCTATCGCCGAGCAGGGTATAGCAATGTTTGGGCCTGT
GCAGGCGAAACGCTATCATGCAGAGTTGTTTAACACTCTGGATTTAATTGCAAAGAACCCACAAATGGCACGTGCACGTG
AAGAAATTTCTCCACCTGTGCGGGTGCACCCGTTTAAAGCCCACCTCATTATTTATCAAATTGAAGCAGACGGAACAGTT
TTTGTAATTCGGGTACGTCATGCATTTGAAGATTGGGTCAGGGATCCGTTTTAA
Antitoxin
Download Length: 94 a.a. Molecular weight: 10562.92 Da Isoelectric Point: 6.4706
>AT185612 WP_003156188.1 NZ_CP067043:c647593-647312 [Bacillus velezensis]
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHYAEC
EAETTVERLVSGG
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHYAEC
EAETTVERLVSGG
Download Length: 282 bp
>AT185612 NZ_CP088966:80896-81150 [Brucella anthropi]
ATGGTAACGATGAACGTATCGCTCCCTCATCCTATGAAAGAATGGGTTGAGGCTCAGGCCAAAACGGGACGCTATTCGAA
TGCGAGTGACTATGTGCGCGATTTGATCCGTAAAGATCAAATGCGCAGCGATAAGATCGCAGCGATGCAGCGCTTTGTTG
ACGAGGGCTTACAAAGTGGCCCAGGAAGTCGTTCACAGGATGAACTCTTCGCAGTGGCACTCGCTAACGCCGAAAAATCT
CTGAAACGCAACTGA
ATGGTAACGATGAACGTATCGCTCCCTCATCCTATGAAAGAATGGGTTGAGGCTCAGGCCAAAACGGGACGCTATTCGAA
TGCGAGTGACTATGTGCGCGATTTGATCCGTAAAGATCAAATGCGCAGCGATAAGATCGCAGCGATGCAGCGCTTTGTTG
ACGAGGGCTTACAAAGTGGCCCAGGAAGTCGTTCACAGGATGAACTCTTCGCAGTGGCACTCGCTAACGCCGAAAAATCT
CTGAAACGCAACTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|