184803

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TsdAT/-
Location 770588..771109 Replicon chromosome
Accession NZ_CP066713
Organism Staphylococcus pseudintermedius strain DSP026

Toxin (Protein)


Gene name TsdT Uniprot ID A0A3D8YLE8
Locus tag JGZ50_RS03430 Protein ID WP_014613364.1
Coordinates 770888..771109 (+) Length 74 a.a.

Antitoxin (Protein)


Gene name TsdA Uniprot ID A0A166R1D0
Locus tag JGZ50_RS03425 Protein ID WP_014613363.1
Coordinates 770588..770875 (+) Length 96 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JGZ50_RS03400 765849..766652 + 804 WP_014613358.1 hydroxyethylthiazole kinase -
JGZ50_RS03405 766642..767280 + 639 WP_014613359.1 thiamine phosphate synthase -
JGZ50_RS03410 767369..768235 + 867 WP_014613360.1 membrane protein insertase YidC -
JGZ50_RS03415 768289..768945 - 657 WP_014613361.1 HD domain-containing protein -
JGZ50_RS03420 768966..770456 - 1491 WP_014613362.1 cardiolipin synthase -
JGZ50_RS03425 770588..770875 + 288 WP_014613363.1 copper-sensing transcriptional repressor CsoR Antitoxin
JGZ50_RS03430 770888..771109 + 222 WP_014613364.1 heavy-metal-associated domain-containing protein Toxin
JGZ50_RS03435 771113..771319 + 207 WP_014613365.1 cation transporter -
JGZ50_RS03440 771420..773600 + 2181 WP_014613366.1 heavy metal translocating P-type ATPase -
JGZ50_RS03445 773686..773832 + 147 WP_014613367.1 hypothetical protein -
JGZ50_RS03450 774799..775527 + 729 WP_187532153.1 peptidase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Heavy metal-associated domain, HMA

(21-64)

Antitoxin

Metal-sensitive transcriptional repressor

(3-93)


Sequences

Toxin        


Download         Length: 74 a.a.        Molecular weight: 8065.10 Da        Isoelectric Point: 4.3480

>T184803 WP_014613364.1 NZ_CP066713:770888-771109 [Staphylococcus pseudintermedius]
MENGYVKVTQLTTEAQQQQLSDRLLRLIGVESVAIDVATQSLTLTYDTPANLNTIEKEIYDAGFPVIQSHKGV

Download         Length: 222 bp

>T184803 NZ_CP087811:435051-435323 [Moraxella bovis]
GTGGCTAAACGTAGTTTTGAAATGGGCAATCCCTTTAAAAGGGATTTAAAAAAGCATTATTTGGCATTGATTGGCGAAGC
GTGGACGGAAGTGTCTGATTGCTTGTTAAATGCCAAACCCATACCTCAAAAATACCAAGACCACCCATTGCAAGGCGATT
GGGTGGGGTTTAGAGATTGTCATATCAAGCCTGATTTGGTGCTAATTTATAAAATAAATGATGAAGCGGTGGAATTACAT
CGGCTTGCCACGCATAGCGAGTTGTTTGGTTGA

Antitoxin


Download         Length: 96 a.a.        Molecular weight: 10997.59 Da        Isoelectric Point: 7.0504

>AT184803 WP_014613363.1 NZ_CP066713:770588-770875 [Staphylococcus pseudintermedius]
MTEQAHHSEEIKRNLKSRLNRIEGQVKAINRMIDEDVYCDDVLTQIRATRSALNSVASRLLDHHMKGCIKHKIDAGHQDE
AMEELLVTFQKLMKD

Download         Length: 288 bp

>AT184803 NZ_CP087811:434765-435058 [Moraxella bovis]
ATGAGCCACACCAATTTTAATATGCGATTAGACAACGACCTACGCCAAAAAGCCTATCCTGTGCTAGAACAATACGGCTT
GACTCCAAGCCAAGCAGTGCGGATGTTTTTTAATCAAATCGCCCAAACAGGCAAAGTGCCATTGTCTTTTGATTGGGGGC
AGTCGCATACGCTTAGTAGCAATGGCGAAAAGCTGTTGCGTGAGAGTATTCAAGCTTTTGAAAATGGCGAAACCGAGCGA
TTTGATAGCTTAGATGAGTTAAATCAAGCAATGGCGGAGATTGCTCGTGGCTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A3D8YLE8

Antitoxin

Source ID Structure
AlphaFold DB A0A166R1D0

References