Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/ParE-RelB |
| Location | 241861..242387 | Replicon | plasmid pOSUCZ140_1 |
| Accession | NZ_CP066554 | ||
| Organism | Enterobacter hormaechei subsp. xiangfangensis strain OSUCZKPC4-140 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | S1EXL1 |
| Locus tag | JFN83_RS24820 | Protein ID | WP_000323025.1 |
| Coordinates | 242100..242387 (+) | Length | 96 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | S1F6D3 |
| Locus tag | JFN83_RS24815 | Protein ID | WP_000534858.1 |
| Coordinates | 241861..242100 (+) | Length | 80 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFN83_RS24795 (JFN83_24675) | 238189..239427 | + | 1239 | WP_000219087.1 | IS110-like element ISEsa2 family transposase | - |
| JFN83_RS24800 (JFN83_24680) | 239903..240475 | + | 573 | WP_001515348.1 | cytochrome b/b6 domain-containing protein | - |
| JFN83_RS24805 (JFN83_24685) | 240675..241598 | + | 924 | WP_000167917.1 | cation diffusion facilitator family transporter | - |
| JFN83_RS24810 | 241732..241836 | - | 105 | Protein_238 | protein YdfV | - |
| JFN83_RS24815 (JFN83_24690) | 241861..242100 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin |
| JFN83_RS24820 (JFN83_24695) | 242100..242387 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin |
| JFN83_RS24825 (JFN83_24700) | 242459..242617 | + | 159 | WP_001447866.1 | type I toxin-antitoxin system Hok family toxin | - |
| JFN83_RS24830 (JFN83_24705) | 243226..243546 | - | 321 | WP_000332796.1 | hypothetical protein | - |
| JFN83_RS24835 (JFN83_24710) | 243828..244031 | - | 204 | WP_001015183.1 | hypothetical protein | - |
| JFN83_RS24840 (JFN83_24715) | 244078..244428 | - | 351 | WP_000743059.1 | hypothetical protein | - |
| JFN83_RS24845 (JFN83_24720) | 244488..245090 | - | 603 | WP_012695474.1 | hypothetical protein | - |
| JFN83_RS24850 (JFN83_24725) | 245186..246130 | - | 945 | WP_000778029.1 | DUF5417 domain-containing protein | - |
| JFN83_RS24855 (JFN83_24730) | 246641..246817 | + | 177 | WP_001371930.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Conjugative plasmid | blaKPC-4 / mcr-9 | - | 1..266565 | 266565 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 96 a.a. Molecular weight: 11225.22 Da Isoelectric Point: 10.1967
>T184677 WP_000323025.1 NZ_CP066554:242100-242387 [Enterobacter hormaechei subsp. xiangfangensis]
MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGK
RERSEVYSEAVKRIL
MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGK
RERSEVYSEAVKRIL
Download Length: 288 bp
>T184677 NZ_CP087771:497830-498102 [Moraxella bovis]
GTGGCTAAACGTAGTTTTGAAATGGGCAATCCCTTTAAAAGGGATTTAAAAAAGCATTATTTGGCATTGATTGGCGAAGC
GTGGACGGAAGTGTCTGATTGCTTGTTAAATGCCAAACCCATACCTCAAAAATACCAAGACCACCCATTGCAAGGCGATT
GGGTGGGGTTTAGAGATTGTCATATCAAGCCTGATTTGGTGCTAATTTATAAAATAAATGATGAAGCGGTGGAATTACAT
CGGCTTGCCACGCATAGCGAGTTGTTTGGTTGA
GTGGCTAAACGTAGTTTTGAAATGGGCAATCCCTTTAAAAGGGATTTAAAAAAGCATTATTTGGCATTGATTGGCGAAGC
GTGGACGGAAGTGTCTGATTGCTTGTTAAATGCCAAACCCATACCTCAAAAATACCAAGACCACCCATTGCAAGGCGATT
GGGTGGGGTTTAGAGATTGTCATATCAAGCCTGATTTGGTGCTAATTTATAAAATAAATGATGAAGCGGTGGAATTACAT
CGGCTTGCCACGCATAGCGAGTTGTTTGGTTGA
Antitoxin
Download Length: 80 a.a. Molecular weight: 9071.48 Da Isoelectric Point: 4.5230
>AT184677 WP_000534858.1 NZ_CP066554:241861-242100 [Enterobacter hormaechei subsp. xiangfangensis]
MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL
MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDEL
Download Length: 240 bp
>AT184677 NZ_CP087771:497544-497837 [Moraxella bovis]
ATGAGCCACACCAATTTTAATATGCGATTAGACAACGACCTACGCCAAAAAGCCTATCCTGTGCTAGAACAATACGGCTT
GACTCCAAGCCAAGCAGTGCGGATGTTTTTTAATCAAATCGCCCAAACAGGCAAAGTGCCATTGTCTTTTGATTGGGGGC
AGTCGCATACGCTTAGTAGCAATGGCGAAAAGCTGTTGCGTGAGAGTATTCAAGCTTTTGAAAATGGCGAAACCGAGCGA
TTTGATAGCTTAGATGAGTTAAATCAAGCAATGGCGGAGATTGCTCGTGGCTAA
ATGAGCCACACCAATTTTAATATGCGATTAGACAACGACCTACGCCAAAAAGCCTATCCTGTGCTAGAACAATACGGCTT
GACTCCAAGCCAAGCAGTGCGGATGTTTTTTAATCAAATCGCCCAAACAGGCAAAGTGCCATTGTCTTTTGATTGGGGGC
AGTCGCATACGCTTAGTAGCAATGGCGAAAAGCTGTTGCGTGAGAGTATTCAAGCTTTTGAAAATGGCGAAACCGAGCGA
TTTGATAGCTTAGATGAGTTAAATCAAGCAATGGCGGAGATTGCTCGTGGCTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|