Detailed information of TA system TA184189

Bioinformatically predicted

Overview

TA module

• Type: IV
• Classification (family/domain): cptAB/-
• Location: 449957..450610
• Replicon: chromosome
• Accession: NZ_CP066235
• Organism: Acinetobacter baumannii strain G20AB009

Toxin (Protein)

• Gene name: cptA
• Uniprot ID: -
• Locus tag: JCR17_RS02195
• Protein ID: WP_000607077.1
• Coordinates: 450221..450610 (+)
• Length: 130 a.a.

Antitoxin (Protein)

• Gene name: cptB
• Uniprot ID: V5V966
• Locus tag: JCR17_RS02190
• Protein ID: WP_001288210.1
• Coordinates: 449957..450214 (+)
• Length: 86 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
JCR17_RS02170	445473..446480	+	1008	WP_000198631.1	DNA-directed RNA polymerase subunit alpha	-
JCR17_RS02175	446499..446876	+	378	WP_001216380.1	50S ribosomal protein L17	-
JCR17_RS02180	447058..448548	+	1491	WP_000415125.1	NAD(P)/FAD-dependent oxidoreductase	-
JCR17_RS02185	448597..449769	-	1173	WP_001190542.1	acyl-CoA dehydrogenase family protein	-
JCR17_RS02190	449957..450214	+	258	WP_001288210.1	succinate dehydrogenase assembly factor 2	Antitoxin
JCR17_RS02195	450221..450610	+	390	WP_000607077.1	membrane protein	Toxin
JCR17_RS02200	451380..452465	+	1086	WP_000049106.1	hypothetical protein	-
JCR17_RS02205	452543..453109	+	567	WP_000651538.1	rhombosortase	-
JCR17_RS02210	453297..455492	+	2196	WP_001158906.1	TRAP transporter large permease subunit	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Antitoxin

• Flavinator of succinate dehydrogenase (10-82)

Sequences

Toxin

Protein

• Length: 130 a.a.
• Molecular weight: 15552.88 Da
• Isoelectric Point: 10.4313

>T184189 WP_000607077.1 NZ_CP066235:450221-450610 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Nucleotide

• Length: 390 bp

>T184189 NZ_CP087564:c2148882-2148547 [Escherichia coli]
ATGGTAAGCCGATACGTACCCGATATGGGCGATCTGATTTGGGTTGATTTTGACCCGACAAAAGGTAGCGAGCAAGCTGG
ACATCGTCCAGCTGTTGTCCTGAGTCCTTTCATGTACAACAACAAAACAGGTATGTGTCTGTGTGTTCCTTGTACAACGC
AATCAAAAGGATATCCGTTCGAAGTTGTTTTATCCGGTCAGGAACGTGATGGCGTAGCGTTAGCTGATCAGGTAAAAAGT
ATCGCCTGGCGGGCAAGAGGAGCAACGAAGAAAGGAACAGTTGCCCCAGAGGAATTACAACTCATTAAAGCCAAAATTAA
CGTACTGATTGGGTAG

Antitoxin

Protein

• Length: 86 a.a.
• Molecular weight: 10318.77 Da
• Isoelectric Point: 4.6150

>AT184189 WP_001288210.1 NZ_CP066235:449957-450214 [Acinetobacter baumannii]
MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLK
HYVHG

Nucleotide

• Length: 258 bp

>AT184189 NZ_CP087564:c2149130-2148882 [Escherichia coli]
ATGATCCACAGTAGCGTAAAGCGTTGGGGAAATTCACCGGCGGTGCGGATCCCGGCTACGTTAATGCAGGCGCTCAATCT
GAATATTGATGATGAAGTGAAGATTGACCTGGTGGATGGCAAATTAATTATTGAGCCAGTGCGTAAAGAGCCCGTATTTA
CGCTTGCTGAACTGGTCAACGACATCACGCCGGAAAACCTCCACGAGAATATCGACTGGGGAGAGCCGAAAGATAAGGAA
GTCTGGTAA

Structures

Antitoxin

• AlphaFold DB: A0A7U4BQM7