Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | /SpoIISA(toxin) |
| Location | 3487113..3488105 | Replicon | chromosome |
| Accession | NZ_CP066187 | ||
| Organism | Bacillus cytotoxicus strain E28.3 | ||
Toxin (Protein)
| Gene name | spoIISA | Uniprot ID | A7GPN6 |
| Locus tag | JC772_RS17630 | Protein ID | WP_012094283.1 |
| Coordinates | 3487113..3487853 (+) | Length | 247 a.a. |
Antitoxin (Protein)
| Gene name | - | Uniprot ID | A7GPN7 |
| Locus tag | JC772_RS17635 | Protein ID | WP_012094285.1 |
| Coordinates | 3487977..3488105 (+) | Length | 43 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JC772_RS17600 (JC772_17600) | 3482253..3482518 | + | 266 | Protein_3413 | hypothetical protein | - |
| JC772_RS17605 (JC772_17605) | 3482588..3483490 | + | 903 | WP_012094278.1 | BadF/BadG/BcrA/BcrD ATPase family protein | - |
| JC772_RS17610 (JC772_17610) | 3483537..3483842 | - | 306 | Protein_3415 | hypothetical protein | - |
| JC772_RS17615 (JC772_17615) | 3484037..3485341 | + | 1305 | WP_087094924.1 | DEAD/DEAH box helicase | - |
| JC772_RS17620 (JC772_17620) | 3485561..3486043 | + | 483 | WP_012094281.1 | helix-turn-helix domain-containing protein | - |
| JC772_RS17625 (JC772_17625) | 3486181..3486918 | + | 738 | WP_012094282.1 | 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | - |
| JC772_RS17630 (JC772_17630) | 3487113..3487853 | + | 741 | WP_012094283.1 | type II toxin-antitoxin system SpoIISA family toxin | Toxin |
| JC772_RS17635 (JC772_17635) | 3487977..3488105 | + | 129 | WP_012094285.1 | hypothetical protein | Antitoxin |
| JC772_RS17640 (JC772_17640) | 3488182..3488358 | + | 177 | WP_087094925.1 | stage II sporulation protein SB | - |
| JC772_RS17645 (JC772_17645) | 3488517..3489062 | - | 546 | WP_087094926.1 | GNAT family N-acetyltransferase | - |
| JC772_RS17650 (JC772_17650) | 3489103..3489984 | - | 882 | WP_087094927.1 | aminoglycoside 6-adenylyltransferase | - |
| JC772_RS17655 (JC772_17655) | 3490190..3491659 | + | 1470 | WP_087094928.1 | aminoacyl-histidine dipeptidase | - |
| JC772_RS17660 (JC772_17660) | 3492258..3492509 | + | 252 | WP_012094290.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 247 a.a. Molecular weight: 28628.30 Da Isoelectric Point: 6.7302
>T184153 WP_012094283.1 NZ_CP066187:3487113-3487853 [Bacillus cytotoxicus]
MTVTSVRIGLFFLVIFFLFLIFFYWRNEERYEERKQLIRKTWYGLFITSVTMYFMMKGIDLTLWKHILMVVAMVVFVDIA
FILTPNISEIWGAKFSDIGKTVQSIKRSLIASKARGEIYTTLIQNVNPAAFGTMEWETDAEYARSLNAFLDTYAEKIGAK
IVVFVTEEELNTNFRGVRSQFSITVSPESIEQLNEQKAVQIENVGIIPAKIIKDVYIIMDGQKNNLQDRDFENVYNLTIH
HSYFCK
MTVTSVRIGLFFLVIFFLFLIFFYWRNEERYEERKQLIRKTWYGLFITSVTMYFMMKGIDLTLWKHILMVVAMVVFVDIA
FILTPNISEIWGAKFSDIGKTVQSIKRSLIASKARGEIYTTLIQNVNPAAFGTMEWETDAEYARSLNAFLDTYAEKIGAK
IVVFVTEEELNTNFRGVRSQFSITVSPESIEQLNEQKAVQIENVGIIPAKIIKDVYIIMDGQKNNLQDRDFENVYNLTIH
HSYFCK
Download Length: 741 bp
>T184153 NZ_CP087390:c3207786-3207403 [Enterobacter sp. AN-K1]
ATGCAAATTTCAACTGCACCGACCACGGAGCCTGTTTCGTCACGCCTGTCGCCTGTCGAGGTCTGGCAGATACTACTCAA
ACATCTTCTGGCACAACACTATGGTCTAACCCTTAATGACACTCCGTTCAGCGATGAAAGCACTATTCGTGAACATATCA
ATGCTGGTATCTCACTCAGCAACGCAGTGAATTTTATCGTCGAAAAATATGAGCTGGTACGTACTGACCATAGTGGATTT
ACGATTATGGAGCAGTCTCCCTTCATCAGCAGTATCGACATTCTTCGTGCCCGCCGGGCCACTGGATTGATGAAACGTCA
TGGTTATAAATCCATCAGCAATATCACTACTGGTCACCTTCTCCAGGAGCGACATTTACGATGA
ATGCAAATTTCAACTGCACCGACCACGGAGCCTGTTTCGTCACGCCTGTCGCCTGTCGAGGTCTGGCAGATACTACTCAA
ACATCTTCTGGCACAACACTATGGTCTAACCCTTAATGACACTCCGTTCAGCGATGAAAGCACTATTCGTGAACATATCA
ATGCTGGTATCTCACTCAGCAACGCAGTGAATTTTATCGTCGAAAAATATGAGCTGGTACGTACTGACCATAGTGGATTT
ACGATTATGGAGCAGTCTCCCTTCATCAGCAGTATCGACATTCTTCGTGCCCGCCGGGCCACTGGATTGATGAAACGTCA
TGGTTATAAATCCATCAGCAATATCACTACTGGTCACCTTCTCCAGGAGCGACATTTACGATGA
Antitoxin
Download Length: 43 a.a. Molecular weight: 4984.43 Da Isoelectric Point: 3.9944
>AT184153 WP_012094285.1 NZ_CP066187:3487977-3488105 [Bacillus cytotoxicus]
VLKEYSNDFFKDEAEDTTDFSLIKGDTMQQVEELEEELKRRG
VLKEYSNDFFKDEAEDTTDFSLIKGDTMQQVEELEEELKRRG
Download Length: 129 bp
>AT184153 NZ_CP087390:c3208160-3207822 [Enterobacter sp. AN-K1]
ATGACTAAAGAACCTGTTCAGGAACACGTGTGGGGTTTACACAGTCAAACCGTTCCATCATTCAGCGCCCGGTTAGTTCA
GGAAGGTCGACGGCTGCATTTTCTGGCCGACCGTGCCACGCTTCTCGGCACATTCAGCCCGGAACAATCCGCAGCGCTGG
ATGCGATCTTCCCAGCATTAATCCGGGATATGGAAACCGCTCTGCTTAGCGGCAAACTCGACCCACGTGAGGCTAAACAA
TACATCTATATCCGCAACGGTTTAACCTGCGAGTCAGATACGTTGGGGAGTTGCGGTTATGTTTACATCGTAATTTATCC
TCAATCAGAAGCCAGCTAG
ATGACTAAAGAACCTGTTCAGGAACACGTGTGGGGTTTACACAGTCAAACCGTTCCATCATTCAGCGCCCGGTTAGTTCA
GGAAGGTCGACGGCTGCATTTTCTGGCCGACCGTGCCACGCTTCTCGGCACATTCAGCCCGGAACAATCCGCAGCGCTGG
ATGCGATCTTCCCAGCATTAATCCGGGATATGGAAACCGCTCTGCTTAGCGGCAAACTCGACCCACGTGAGGCTAAACAA
TACATCTATATCCGCAACGGTTTAACCTGCGAGTCAGATACGTTGGGGAGTTGCGGTTATGTTTACATCGTAATTTATCC
TCAATCAGAAGCCAGCTAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|