Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) BrnTA/BrnT_toxin-BrnA
Location 2396740..2397286 Replicon chromosome
Accession NZ_CP065748
Organism Delftia lacustris strain FDAARGOS_890

Toxin (Protein)


Gene name brnT Uniprot ID -
Locus tag I6G47_RS11200 Protein ID WP_198129381.1
Coordinates 2396740..2397006 (+) Length 89 a.a.

Antitoxin (Protein)


Gene name brnA Uniprot ID -
Locus tag I6G47_RS11205 Protein ID WP_198129382.1
Coordinates 2396993..2397286 (+) Length 98 a.a.

Genomic Context

I6G47_RS11175I6G47_RS11180I6G47_RS11185I6G47_RS11190I6G47_RS11195I6G47_RS11200I6G47_RS11205I6G47_RS11210I6G47_RS11215I6G47_RS11240I6G47_RS11245I6G47_RS11250I6G47_RS11255I6G47_RS11260I6G47_RS11220I6G47_RS11225I6G47_RS11230I6G47_RS11235
Location: 2392070..2392501 (432 bp)
Type: Others
Protein ID: WP_198129376.1
Location: 2392510..2392635 (126 bp)
Type: Others
Protein ID: WP_198129377.1
Location: 2392628..2395135 (2508 bp)
Type: Others
Protein ID: WP_198129378.1
Location: 2395146..2395607 (462 bp)
Type: Others
Protein ID: WP_198129379.1
Location: 2395607..2396686 (1080 bp)
Type: Others
Protein ID: WP_198129380.1
Location: 2396740..2397006 (267 bp)
Type: Toxin
Protein ID: WP_198129381.1
Location: 2396993..2397286 (294 bp)
Type: Antitoxin
Protein ID: WP_198129382.1
Location: 2397350..2397652 (303 bp)
Type: Others
Protein ID: WP_133073838.1
Location: 2397649..2397885 (237 bp)
Type: Others
Protein ID: WP_198129383.1
Location: 2400341..2400589 (249 bp)
Type: Others
Protein ID: WP_198129388.1
Location: 2400786..2401142 (357 bp)
Type: Others
Protein ID: WP_133073832.1
Location: 2401257..2401667 (411 bp)
Type: Others
Protein ID: WP_133073831.1
Location: 2401664..2401891 (228 bp)
Type: Others
Protein ID: WP_133073830.1
Location: 2401888..2402046 (159 bp)
Type: Others
Protein ID: WP_189354251.1
Location: 2397923..2398144 (222 bp)
Type: Others
Protein ID: WP_198129384.1
Location: 2398131..2398493 (363 bp)
Type: Others
Protein ID: WP_198129385.1
Location: 2398698..2399645 (948 bp)
Type: Others
Protein ID: WP_198129386.1
Location: 2399697..2400260 (564 bp)
Type: Others
Protein ID: WP_198129387.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
I6G47_RS111752392070..2392501+432WP_198129376.1phage tail assembly protein-
I6G47_RS111802392510..2392635+126WP_198129377.1GpE family phage tail protein-
I6G47_RS111852392628..2395135+2508WP_198129378.1phage tail tape measure protein-
I6G47_RS111902395146..2395607+462WP_198129379.1phage tail protein-
I6G47_RS111952395607..2396686+1080WP_198129380.1phage late control D family protein-
I6G47_RS112002396740..2397006+267WP_198129381.1BrnT family toxinToxin
I6G47_RS112052396993..2397286+294WP_198129382.1BrnA antitoxin family proteinAntitoxin
I6G47_RS112102397350..2397652+303WP_133073838.1hypothetical protein-
I6G47_RS112152397649..2397885+237WP_198129383.1hypothetical protein-
I6G47_RS112202397923..2398144-222WP_198129384.1hypothetical protein-
I6G47_RS112252398131..2398493-363WP_198129385.1hypothetical protein-
I6G47_RS112302398698..2399645-948WP_198129386.1WYL domain-containing protein-
I6G47_RS112352399697..2400260-564WP_198129387.1transcriptional regulator-
I6G47_RS112402400341..2400589+249WP_198129388.1hypothetical protein-
I6G47_RS112452400786..2401142+357WP_133073832.1ogr/Delta-like zinc finger family protein-
I6G47_RS112502401257..2401667+411WP_133073831.1hypothetical protein-
I6G47_RS112552401664..2401891+228WP_133073830.1hypothetical protein-
I6G47_RS112602401888..2402046+159WP_189354251.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideProphage--2370009..240952039511


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease toxin, BrnT, of type II toxin-antitoxin system

(5-81)

Antitoxin

BrnA antitoxin of type II toxin-antitoxin system

(29-90)


Sequences

Toxin        


Download         Length: 89 a.a.        Molecular weight: 10039.52 Da        Isoelectric Point: 6.4605

>T183314 WP_198129381.1 NZ_CP065748:2396740-2397006 [Delftia lacustris]
MDIEFDPAKNQANIDKHGVSLEMAGHIEWSDVLCMPDARRDYGEVREIGFAVIGQRLYVVVFVQRGQTMRIVSLRKANSR
EVKAYEAI

Download         Length: 267 bp

>T183314 NZ_CP086885:11630-11905 [Pseudosulfitobacter pseudonitzschiae]
GTGCCTGACCTTGAATGGAAGGCATTGGCGGTCGCGGACCTGATGGCGATTGTTGACTATATCTCGGATGACAATCCCGA
TGCCGCAATTTCCCTGATGGATGACATTCAAGACAAGGTGCTTGGCCTTCTGACGCATCCCAAATCCGGCCGCCCCGGTA
GGGTGAACGACACGCGAGAGCTGGTGATCCGGCCCAACTATATCGTCGTCTATGCTGAAAACACGGCGGCGGTCACCATT
CTGCGCGTTCTTCATGCGGTGCAGATGTGGCCCTGA

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 10486.22 Da        Isoelectric Point: 9.9469

>AT183314 WP_198129382.1 NZ_CP065748:2396993-2397286 [Delftia lacustris]
MKQSKKVGLIQPTAAEDAAIARGIEQDPDTMEITGDMLAGMQTLARRGRPPLEQPKMPMTMRVDADVLEAIKATGAGWQS
RVNEVLREAVKKGKLAA

Download         Length: 294 bp

>AT183314 NZ_CP086885:11344-11637 [Pseudosulfitobacter pseudonitzschiae]
ATGTCCGCTCAAACCTCGATGATTCATGTTCGTGTAGATGATCAGCTCAAGGCAAAGGCCACGGATGCCCTGTCCGGTGT
CGGCCTGACGTTGTCGGACGCCGTGCGCATCCTGCTGACCCGCGTGGCAGCAGAGGGTGGCTTGCCCGCAGGGTTGACGG
CAAATCCTGACGCCTACGATGCCTGGTTCCGCGCCAAGGTACAGGACGCATTGGCCGACGCAGCACCGGCCAAGCCGCAC
GATCAGGTGATGCGAGACGCGCGCGCCTTGATCGACGGCAAGCGCGGTGCCTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References