Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tad-ata/Tad-HTH_37
Location 1528212..1528908 Replicon chromosome
Accession NZ_CP064781
Organism Azospira restricta strain DSM 18626

Toxin (Protein)


Gene name tad Uniprot ID -
Locus tag IWH25_RS07535 Protein ID WP_203388699.1
Coordinates 1528212..1528589 (+) Length 126 a.a.

Antitoxin (Protein)


Gene name ata Uniprot ID -
Locus tag IWH25_RS07540 Protein ID WP_203388700.1
Coordinates 1528573..1528908 (+) Length 112 a.a.

Genomic Context

IWH25_RS07515IWH25_RS07520IWH25_RS07525IWH25_RS07530IWH25_RS07535IWH25_RS07540IWH25_RS07545IWH25_RS07550IWH25_RS07555IWH25_RS07560
Location: 1525589..1526473 (885 bp)
Type: Others
Protein ID: WP_203388695.1
Location: 1526525..1527121 (597 bp)
Type: Others
Protein ID: WP_203388696.1
Location: 1527136..1527981 (846 bp)
Type: Others
Protein ID: WP_203388697.1
Location: 1528012..1528188 (177 bp)
Type: Others
Protein ID: WP_203388698.1
Location: 1528212..1528589 (378 bp)
Type: Toxin
Protein ID: WP_203388699.1
Location: 1528573..1528908 (336 bp)
Type: Antitoxin
Protein ID: WP_203388700.1
Location: 1529097..1529333 (237 bp)
Type: Others
Protein ID: WP_203388701.1
Location: 1529344..1529748 (405 bp)
Type: Others
Protein ID: WP_203388702.1
Location: 1529766..1532102 (2337 bp)
Type: Others
Protein ID: WP_203388703.1
Location: 1532161..1532988 (828 bp)
Type: Others
Protein ID: WP_203388704.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
IWH25_RS075151525589..1526473+885WP_203388695.1hypothetical protein-
IWH25_RS075201526525..1527121+597WP_203388696.1hypothetical protein-
IWH25_RS075251527136..1527981+846WP_203388697.1restriction endonuclease-
IWH25_RS075301528012..1528188+177WP_203388698.1hypothetical protein-
IWH25_RS075351528212..1528589+378WP_203388699.1type II toxin-antitoxin system RelE/ParE family toxinToxin
IWH25_RS075401528573..1528908+336WP_203388700.1helix-turn-helix domain-containing proteinAntitoxin
IWH25_RS075451529097..1529333+237WP_203388701.1AbrB/MazE/SpoVT family DNA-binding domain-containing protein-
IWH25_RS075501529344..1529748+405WP_203388702.1type II toxin-antitoxin system VapC family toxin-
IWH25_RS075551529766..1532102+2337WP_203388703.1penicillin-binding protein 1C-
IWH25_RS075601532161..1532988+828WP_203388704.1mechanosensitive ion channel family protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-like

(20-111)

Antitoxin

HigA2-like, helix-turn-helix domain

(15-94)


Sequences

Toxin        


Download         Length: 126 a.a.        Molecular weight: 14177.12 Da        Isoelectric Point: 8.8061

>T181718 WP_203388699.1 NZ_CP064781:1528212-1528589 [Azospira restricta]
VTASPRKERPLHWVGSTKRDLLDFPDDVIDEFGYSLGVVQLGGQPPAAKPWKGEGPGVFELVEDARGDTYRVAYTVRFAK
AIYVLHCFQKKSPSGIRTARTDVELIHERLKLARDDYEVRYGKEK

Download         Length: 378 bp

>T181718 NZ_CP086111:840615-840875 [Skermanella rosea]
GTGCAGATCCAGATACTCCCGAAAGCGGCGAAGGACCTCAAGGCGCTGGCGCCGCCGGACCGAGCCCGCGTCGTCTCCAA
AATCGAGCAGTACGCCGCCGACCCCGCTTCGCTGGTCAACAACGTCAAGGCATTGCAGGGGTCTGACCTGTTTCGCCTGC
GCGTAGGGGATTATCGGATCCTTTTCACCGTTAACGAAGACGGCACCGTGTCTGTCCTGCTGGTCCACCGCGTTCGACAC
CGGAGAGAAGCCTATGACTGA

Antitoxin


Download         Length: 112 a.a.        Molecular weight: 12467.35 Da        Isoelectric Point: 9.9988

>AT181718 WP_203388700.1 NZ_CP064781:1528573-1528908 [Azospira restricta]
MARKNESVEVGSGNVFKDLGYADADERKLRTQLAMRLNDLLKERKLTQTAAAQIFGIPQPHVSELRNYKLSRFSSERLLH
FITLLDKDVEIVIRPKAANHEAGHVSVLVAA

Download         Length: 336 bp

>AT181718 NZ_CP086111:840868-841194 [Skermanella rosea]
ATGACTGAGACGCTCACCATTTCCCGCGCCGAGTACGACGCGCTCACCGAGCGGGTCGAGGACCTGGAAGATATCCTGGC
TGCGATGAACGCGCGCGGTGGTCAGCCGATGCCGCTGGAGTGGGCCGGGCGAATCATCAATGGGGAGAGCGCCATCCGGG
TCTGGCGCGAGTTCCGGGGGCTGTCGCTGCGGGCGCTCGCCGCCAAGTCGGGTGTGAGCGCGGGTTATCTGTCCGAGATC
GAGGCGGGCAAGAAGCCCGGGTCGGTGGAGGCCTACAAGGCGCTCGCAGAGGCCTTGGACACGTCCGTTGATTGGCTGGT
CCTGTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References