Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | omega-epsilon-zeta/zeta-epsilon |
Location | 1197651..1198233 | Replicon | chromosome |
Accession | NZ_CP064374 | ||
Organism | Enterococcus faecalis strain PartL-Efaecalis-RM8376 |
Toxin (Protein)
Gene name | zeta | Uniprot ID | A0A0M2AE74 |
Locus tag | IUJ47_RS05880 | Protein ID | WP_002355414.1 |
Coordinates | 1197925..1198233 (+) | Length | 103 a.a. |
Antitoxin (Protein)
Gene name | epsilon | Uniprot ID | Q9AL19 |
Locus tag | IUJ47_RS05875 | Protein ID | WP_002326825.1 |
Coordinates | 1197651..1197923 (+) | Length | 91 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
IUJ47_RS05845 (1192932) | 1192932..1193660 | - | 729 | WP_002355404.1 | GntR family transcriptional regulator | - |
IUJ47_RS05850 (1193837) | 1193837..1194763 | + | 927 | WP_002355406.1 | hypothetical protein | - |
IUJ47_RS05855 (1194780) | 1194780..1196063 | + | 1284 | WP_002363033.1 | PTS sugar transporter subunit IIC | - |
IUJ47_RS05860 (1196255) | 1196255..1196377 | + | 123 | Protein_1123 | topoisomerase | - |
IUJ47_RS05865 (1196452) | 1196452..1197348 | + | 897 | WP_002363034.1 | ParA family protein | - |
IUJ47_RS05870 (1197425) | 1197425..1197634 | + | 210 | WP_002363035.1 | peptide-binding protein | - |
IUJ47_RS05875 (1197651) | 1197651..1197923 | + | 273 | WP_002326825.1 | antitoxin | Antitoxin |
IUJ47_RS05880 (1197925) | 1197925..1198233 | + | 309 | WP_002355414.1 | zeta toxin family protein | Toxin |
IUJ47_RS05885 (1198313) | 1198313..1198720 | - | 408 | WP_224571294.1 | tyrosine-type recombinase/integrase | - |
IUJ47_RS05890 (1198787) | 1198787..1199287 | - | 501 | WP_002363039.1 | HAD family hydrolase | - |
IUJ47_RS05895 (1199292) | 1199292..1200059 | - | 768 | WP_002355416.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
IUJ47_RS05900 (1200546) | 1200546..1200971 | + | 426 | WP_002355418.1 | galactose-6-phosphate isomerase subunit LacA | - |
IUJ47_RS05905 (1200988) | 1200988..1201503 | + | 516 | WP_002345825.1 | galactose-6-phosphate isomerase subunit LacB | - |
IUJ47_RS05910 (1201514) | 1201514..1202446 | + | 933 | WP_002363040.1 | tagatose-6-phosphate kinase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 103 a.a. Molecular weight: 11525.91 Da Isoelectric Point: 5.7251
>T181003 WP_002355414.1 NZ_CP064374:1197925-1198233 [Enterococcus faecalis]
MANITDFTEKQFEDRLEKNVERLTKNRLAVESPTAFLLGGQPGSGKTSLRSAISEETQGNVVIIDNDTFKQQHPNFDELV
KLYEKDVVKHATSYSNQLVKLN
MANITDFTEKQFEDRLEKNVERLTKNRLAVESPTAFLLGGQPGSGKTSLRSAISEETQGNVVIIDNDTFKQQHPNFDELV
KLYEKDVVKHATSYSNQLVKLN
Download Length: 309 bp
>T181003 NZ_CP085797:4505507-4505725 [Salmonella enterica subsp. enterica serovar Enteritidis]
ATGTCTGATAAACCATTAACTAAAACTGATTATTTGATGCGTTTACGGCGCTGTCAGACAATTGACACTCTGGAGCGCGT
CATTGAGAAAAATAAATATGAATTGTCCGACAATGAGCTGGCTGTATTTTACTCAGCTGCGGATCACCGTCTTGCAGAAT
TGACGATGAACAAACTCTACGACAAGATCCCCTCTTCAGTATGGAAATTCATTCGTTAA
ATGTCTGATAAACCATTAACTAAAACTGATTATTTGATGCGTTTACGGCGCTGTCAGACAATTGACACTCTGGAGCGCGT
CATTGAGAAAAATAAATATGAATTGTCCGACAATGAGCTGGCTGTATTTTACTCAGCTGCGGATCACCGTCTTGCAGAAT
TGACGATGAACAAACTCTACGACAAGATCCCCTCTTCAGTATGGAAATTCATTCGTTAA
Antitoxin
Download Length: 91 a.a. Molecular weight: 10720.17 Da Isoelectric Point: 4.4865
>AT181003 WP_002326825.1 NZ_CP064374:1197651-1197923 [Enterococcus faecalis]
MAVTYEKTFEIEIINELSASVYNRVLNYVLNHELDTKNTRLLEVNLLNQLEVAQEVDLFQQPFEELQAIHEYWRSMNQYS
KQILTKEKVA
MAVTYEKTFEIEIINELSASVYNRVLNYVLNHELDTKNTRLLEVNLLNQLEVAQEVDLFQQPFEELQAIHEYWRSMNQYS
KQILTKEKVA
Download Length: 273 bp
>AT181003 NZ_CP085797:4505105-4505479 [Salmonella enterica subsp. enterica serovar Enteritidis]
ATGGACGAATACTCACCCAAAAGACATGATATAGCACAGCTTAAATTTCTTTGCGAAACCCTGTATCATGACTGTCTTGC
AAACCTTGAAGAAAGCAACCATGGCTGGGTTAATGACCCGACCTCAGCAGTCAACCTGCAGCTCAATGAGCTGATAGAGC
ATATTGCAACTTTCGCGCTTAATTATAAAATTAAGTACAATGAAGACAATAAATTGATTGCGCAGATAGATGAATACCTG
GACGACACCTTTATGTTGTTCAGCAGCTATGGTATTAATACGCAGGATTTGCAAAAATGGCGTAAATCGGGCAACCGCCT
GTTCCGTTGTTTCGTCAACGCCACCAGGGCCAATCCTGTTAGTTTGTCTTGTTAA
ATGGACGAATACTCACCCAAAAGACATGATATAGCACAGCTTAAATTTCTTTGCGAAACCCTGTATCATGACTGTCTTGC
AAACCTTGAAGAAAGCAACCATGGCTGGGTTAATGACCCGACCTCAGCAGTCAACCTGCAGCTCAATGAGCTGATAGAGC
ATATTGCAACTTTCGCGCTTAATTATAAAATTAAGTACAATGAAGACAATAAATTGATTGCGCAGATAGATGAATACCTG
GACGACACCTTTATGTTGTTCAGCAGCTATGGTATTAATACGCAGGATTTGCAAAAATGGCGTAAATCGGGCAACCGCCT
GTTCCGTTGTTTCGTCAACGCCACCAGGGCCAATCCTGTTAGTTTGTCTTGTTAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0M2AE74 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0M2AF93 |