180711

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) Hha-TomB/-
Location 4202807..4203426 Replicon chromosome
Accession NZ_CP064246
Organism Klebsiella pneumoniae strain JX-CR-hvKP-2

Toxin (Protein)


Gene name Hha Uniprot ID R8WYV2
Locus tag IS498_RS20885 Protein ID WP_002892050.1
Coordinates 4203208..4203426 (+) Length 73 a.a.

Antitoxin (Protein)


Gene name TomB Uniprot ID J2DPF6
Locus tag IS498_RS20880 Protein ID WP_002892066.1
Coordinates 4202807..4203181 (+) Length 125 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IS498_RS20870 4197959..4199152 + 1194 WP_002892072.1 multidrug efflux RND transporter periplasmic adaptor subunit AcrA -
IS498_RS20875 4199175..4202321 + 3147 WP_020326861.1 multidrug efflux RND transporter permease subunit -
IS498_RS20880 4202807..4203181 + 375 WP_002892066.1 Hha toxicity modulator TomB Antitoxin
IS498_RS20885 4203208..4203426 + 219 WP_002892050.1 hemolysin expression modulator Hha Toxin
IS498_RS20890 4203585..4204151 + 567 WP_002892030.1 maltose O-acetyltransferase -
IS498_RS20895 4204123..4204263 - 141 WP_004147370.1 hypothetical protein -
IS498_RS20900 4204284..4204754 + 471 WP_002892026.1 YlaC family protein -
IS498_RS20905 4204729..4206180 - 1452 WP_194820550.1 PLP-dependent aminotransferase family protein -
IS498_RS20910 4206281..4206979 + 699 WP_002892021.1 GNAT family N-acetyltransferase -
IS498_RS20915 4206976..4207116 - 141 WP_002892018.1 type B 50S ribosomal protein L36 -
IS498_RS20920 4207116..4207379 - 264 WP_002892011.1 type B 50S ribosomal protein L31 -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Haemolysin expression modulating, HHA

(13-69)

Antitoxin

Biofilm formation regulator YbaJ

(1-116)


Sequences

Toxin        


Download         Length: 73 a.a.        Molecular weight: 8628.00 Da        Isoelectric Point: 8.9008

>T180711 WP_002892050.1 NZ_CP064246:4203208-4203426 [Klebsiella pneumoniae]
MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPTSVWKFIR

Download         Length: 219 bp

>T180711 NZ_CP085638:c1914630-1914523 [Escherichia coli]
ATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATTACCGCAGCGAT
TGTCGGCTGGTGGCGTAACCGGAAGTAA

Antitoxin


Download         Length: 125 a.a.        Molecular weight: 14368.06 Da        Isoelectric Point: 4.8989

>AT180711 WP_002892066.1 NZ_CP064246:4202807-4203181 [Klebsiella pneumoniae]
MDEYSPKRHDIAQLRFLCETLYHDCLANLEESNHGWVNDPTSAVNLQLNELIEHIATFALNYKIKYAEDNKLIAQVDEYL
DDTFTLFSNYGINSTDLQKWKKSGNRLFRCFVNASRENPASLSC

Download         Length: 375 bp

>AT180711 NZ_CP085638:1914678-1914744 [Escherichia coli]
GTTCTGGTTCAAGATTAGCCCCCGTTCTGTTGTCAGGTTAAACCTCTCAACGTGCGGGGGTTTTCTC

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2P8K6F2

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GJ93

References