Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2676588..2677059 | Replicon | chromosome |
| Accession | NZ_CP062782 | ||
| Organism | Escherichia coli O157:H7 strain Z869 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | ILQ35_RS13635 | Protein ID | WP_001303511.1 |
| Coordinates | 2676588..2676866 (-) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | ILQ35_RS13640 | Protein ID | WP_001302048.1 |
| Coordinates | 2676868..2677059 (-) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ILQ35_RS13600 | 2671594..2671778 | - | 185 | Protein_2656 | DUF3596 domain-containing protein | - |
| ILQ35_RS13605 | 2671813..2672064 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| ILQ35_RS13610 | 2672137..2674608 | - | 2472 | WP_000048458.1 | exonuclease | - |
| ILQ35_RS13615 | 2674701..2674892 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| ILQ35_RS13620 | 2674889..2675077 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| ILQ35_RS13625 | 2675646..2675864 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| ILQ35_RS13630 | 2675936..2676235 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| ILQ35_RS13635 | 2676588..2676866 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| ILQ35_RS13640 | 2676868..2677059 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| ILQ35_RS13645 | 2677080..2677451 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| ILQ35_RS13650 | 2677549..2677851 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| ILQ35_RS13655 | 2677848..2678273 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| ILQ35_RS13660 | 2678296..2679258 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| ILQ35_RS13665 | 2679265..2680005 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| ILQ35_RS13670 | 2680031..2680800 | + | 770 | Protein_2670 | DUF1627 domain-containing protein | - |
| ILQ35_RS13675 | 2680816..2681211 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| ILQ35_RS13680 | 2681268..2681852 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 2663192..2712590 | 49398 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 93 a.a. Molecular weight: 10661.25 Da Isoelectric Point: 5.5647
>T176583 WP_001303511.1 NZ_CP062782:c2676866-2676588 [Escherichia coli O157:H7]
MLPVLWLESADTDLDDITSYIARFDIDAAERLWQRLRGCVLPLSEHPYLYPPSDRVPGLREIVAHPNYIILYRVTTSSVE
VVNVIHARRQFP
MLPVLWLESADTDLDDITSYIARFDIDAAERLWQRLRGCVLPLSEHPYLYPPSDRVPGLREIVAHPNYIILYRVTTSSVE
VVNVIHARRQFP
Download Length: 279 bp
>T176583 NZ_CP082835:c3657013-3656678 [Escherichia coli]
ATGGTAAGCCGATACGTACCCGATATGGGCGATCTGATTTGGGTTGATTTTGACCCGACAAAAGGTAGCGAGCAAGCCGG
ACATCGTCCGGCTGTTGTCCTGAGTCCGTTCATGTACAACAACAAAACAGGTATGTGTCTGTGTGTTCCTTGTACAACGC
AATCAAAAGGATATCCGTTCGAAGTTGTTTTATCCGGTCAGGAACGTGATGGCGTAGCGTTAGCTGATCAGGTAAAAAGT
ATCGCCTGGCGGGCAAGAGGAGCAACGAAGAAAGGAACGGTTGCCCCAGAGGAATTACAACTCATTAAAGCCAAAATTAA
CGTACTGATTGGGTAG
ATGGTAAGCCGATACGTACCCGATATGGGCGATCTGATTTGGGTTGATTTTGACCCGACAAAAGGTAGCGAGCAAGCCGG
ACATCGTCCGGCTGTTGTCCTGAGTCCGTTCATGTACAACAACAAAACAGGTATGTGTCTGTGTGTTCCTTGTACAACGC
AATCAAAAGGATATCCGTTCGAAGTTGTTTTATCCGGTCAGGAACGTGATGGCGTAGCGTTAGCTGATCAGGTAAAAAGT
ATCGCCTGGCGGGCAAGAGGAGCAACGAAGAAAGGAACGGTTGCCCCAGAGGAATTACAACTCATTAAAGCCAAAATTAA
CGTACTGATTGGGTAG
Antitoxin
Download Length: 64 a.a. Molecular weight: 7463.47 Da Isoelectric Point: 8.6828
>AT176583 WP_001302048.1 NZ_CP062782:c2677059-2676868 [Escherichia coli O157:H7]
MNRALSPMVSEFETIEQENSYNEWLRAKVATSLADPRPAIPHDEVERRMAERFAKMRKERSKQ
MNRALSPMVSEFETIEQENSYNEWLRAKVATSLADPRPAIPHDEVERRMAERFAKMRKERSKQ
Download Length: 192 bp
>AT176583 NZ_CP082835:c3657261-3657013 [Escherichia coli]
ATGATCCACAGTAGCGTAAAGCGTTGGGGAAATTCACCGGCGGTGCGGATCCCGGCTACGTTAATGCAGGCGCTCAATCT
GAATATTGATGATGAAGTGAAGATTGACCTGGTGGATGGCAAATTAATTATTGAGCCAGTGCGTAAAGAGCCCGTATTTA
CGCTTGCTGAACTGGTCAACGACATCACGCCGGAAAACCTCCACGAGAATATCGACTGGGGAGAGCCGAAAGATAAGGAA
GTCTGGTAA
ATGATCCACAGTAGCGTAAAGCGTTGGGGAAATTCACCGGCGGTGCGGATCCCGGCTACGTTAATGCAGGCGCTCAATCT
GAATATTGATGATGAAGTGAAGATTGACCTGGTGGATGGCAAATTAATTATTGAGCCAGTGCGTAAAGAGCCCGTATTTA
CGCTTGCTGAACTGGTCAACGACATCACGCCGGAAAACCTCCACGAGAATATCGACTGGGGAGAGCCGAAAGATAAGGAA
GTCTGGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|