Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TsdAT/-
Location 2639791..2640305 Replicon chromosome
Accession NZ_CP062338
Organism Staphylococcus aureus strain NAS_NP_103

Toxin (Protein)


Gene name TsdT Uniprot ID T1YA99
Locus tag IF745_RS12995 Protein ID WP_000581792.1
Coordinates 2640096..2640305 (+) Length 70 a.a.

Antitoxin (Protein)


Gene name TsdA Uniprot ID W8UW13
Locus tag IF745_RS12990 Protein ID WP_000138932.1
Coordinates 2639791..2640084 (+) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IF745_RS12970 (2635155) 2635155..2635796 + 642 WP_000483156.1 thiamine phosphate synthase -
IF745_RS12975 (2635882) 2635882..2636754 + 873 WP_000725800.1 membrane protein insertase YidC -
IF745_RS12980 (2637466) 2637466..2638113 - 648 WP_001187630.1 HD domain-containing protein -
IF745_RS12985 (2638141) 2638141..2639625 - 1485 WP_000571549.1 cardiolipin synthase -
IF745_RS12990 (2639791) 2639791..2640084 + 294 WP_000138932.1 copper-sensing transcriptional repressor CsoR Antitoxin
IF745_RS12995 (2640096) 2640096..2640305 + 210 WP_000581792.1 heavy metal-associated domain-containing protein Toxin
IF745_RS13000 (2640433) 2640433..2640570 + 138 WP_000828354.1 Lmo0850 family protein -
IF745_RS13005 (2640834) 2640834..2642036 - 1203 WP_001109939.1 FtsW/RodA/SpoVE family cell cycle protein -
IF745_RS13010 (2642354) 2642354..2643424 + 1071 WP_000159631.1 D-alanine--D-alanine ligase -
IF745_RS13015 (2643439) 2643439..2644797 + 1359 WP_000611464.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Heavy metal-associated domain, HMA

(23-66)

Antitoxin

Metal-sensitive transcriptional repressor

(14-92)


Sequences

Toxin        


Download         Length: 70 a.a.        Molecular weight: 7843.77 Da        Isoelectric Point: 4.1008

>T174404 WP_000581792.1 NZ_CP062338:2640096-2640305 [Staphylococcus aureus]
MIHQNTIYTAGIETEEQVSQLTERISNMIGVHQVNINIIDGQVTVSYETPANLNSIEKEIYDEGYKIVF

Download         Length: 210 bp

>T174404 NZ_CP081007:4056157-4056498 [Escherichia coli]
ATGAAAACTTTACCTGCAATAACTCAGCGGGCGGTGAAGCCCTGCCTGTCACCCGTGGCTGTCTGGCAAATGTTACTGAC
ACGTCTGCTGGAACAGCACTATGGTCTGACAATAAACGACACGCCATTCTGCAATGAGGCTGTGATTAAGGAACACATCG
ATGCCGGTATCACCCTAGCCGATGCCGTGAATTTTCTGGTAGAAAAATACGAGCTGGTTCGTATCGACAGGAAGGGATTT
AGCTGGCAGGAACAATCTCCTTATCTCCGGGCTGCAGACATTCTGCGAGCGCGGCAGGCAACTGGCTTGTTGCGGCAAAG
CCGTAACAACGTAGTACGATGA

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 11197.82 Da        Isoelectric Point: 6.2243

>AT174404 WP_000138932.1 NZ_CP062338:2639791-2640084 [Staphylococcus aureus]
MTEQDNAHHSEQIKTNLKSRLNRIEGQVRAINRMIEEDVYCDDVLTQIRATRSALNSVAIKLLEQHMKSCIMNKVNQGAQ
EEAMEELLVTFQKLIKD

Download         Length: 294 bp

>AT174404 NZ_CP081007:4055819-4056136 [Escherichia coli]
ATGAGCAACCCTACCAGGGGCCTGCAGCGGGAGATTACACTGCGCCTGGGAGCCCGTCTGGTGCAGGAAGGCAACCGACT
GCATTATCTGGCTGACCGGGCCAGCATCACCGGCAAGTTCAGTGACATCGAATGCCGGAAGCTGGATGAAACATTCCCGC
ACTTTATCCTCCAGATGGAATCGATGCTGACCACCGGTGAACTCAGCCCCCACCATGCCCACTGCGTTACCCTGTACCAC
AACGATTTAACCTGCGAAGCCGACACCCTTGGCAGTTGCGGCTACGTATACATCGCCATTTACCCCACTCAGCGTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 6FF1

Antitoxin

Source ID Structure
AlphaFold DB W8UW13

References