Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | /HTH_19(antitoxin) |
| Location | 1175323..1176111 | Replicon | chromosome |
| Accession | NZ_CP062322 | ||
| Organism | Staphylococcus aureus strain NAS_OP_071 | ||
Toxin (Protein)
| Gene name | - | Uniprot ID | - |
| Locus tag | IF768_RS05940 | Protein ID | WP_000525008.1 |
| Coordinates | 1175650..1176111 (+) | Length | 154 a.a. |
Antitoxin (Protein)
| Gene name | - | Uniprot ID | A0A0E7YIA0 |
| Locus tag | IF768_RS05935 | Protein ID | WP_000333630.1 |
| Coordinates | 1175323..1175637 (+) | Length | 105 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF768_RS05880 (1170718) | 1170718..1171506 | - | 789 | WP_064266590.1 | ATP-binding protein | - |
| IF768_RS05885 (1171499) | 1171499..1171720 | - | 222 | WP_015978316.1 | DUF2483 family protein | - |
| IF768_RS05890 (1171730) | 1171730..1171990 | - | 261 | WP_000291090.1 | DUF1108 family protein | - |
| IF768_RS05895 (1172082) | 1172082..1172243 | - | 162 | WP_000066017.1 | DUF1270 domain-containing protein | - |
| IF768_RS05900 (1172236) | 1172236..1172457 | - | 222 | WP_000594789.1 | hypothetical protein | - |
| IF768_RS05905 (1172528) | 1172528..1173181 | + | 654 | WP_001556705.1 | hypothetical protein | - |
| IF768_RS05910 (1173191) | 1173191..1173334 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| IF768_RS05915 (1173350) | 1173350..1174099 | - | 750 | WP_015978301.1 | phage antirepressor KilAC domain-containing protein | - |
| IF768_RS05920 (1174159) | 1174159..1174641 | + | 483 | WP_000394410.1 | hypothetical protein | - |
| IF768_RS05925 (1174742) | 1174742..1174921 | - | 180 | WP_000438352.1 | hypothetical protein | - |
| IF768_RS05930 (1174935) | 1174935..1175171 | - | 237 | WP_001121116.1 | helix-turn-helix transcriptional regulator | - |
| IF768_RS05935 (1175323) | 1175323..1175637 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | Antitoxin |
| IF768_RS05940 (1175650) | 1175650..1176111 | + | 462 | WP_000525008.1 | hypothetical protein | Toxin |
| IF768_RS05945 (1176129) | 1176129..1176554 | + | 426 | WP_015967225.1 | hypothetical protein | - |
| IF768_RS05950 (1176544) | 1176544..1176915 | + | 372 | WP_015967224.1 | hypothetical protein | - |
| IF768_RS05955 (1176973) | 1176973..1178022 | + | 1050 | WP_001145728.1 | tyrosine-type recombinase/integrase | - |
| IF768_RS05960 (1178090) | 1178090..1179487 | - | 1398 | WP_001074405.1 | Fe-S cluster assembly protein SufB | - |
| IF768_RS05965 (1179638) | 1179638..1180102 | - | 465 | WP_001010508.1 | SUF system NifU family Fe-S cluster assembly protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | vWbp | 1131061..1211393 | 80332 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 154 a.a. Molecular weight: 18034.35 Da Isoelectric Point: 4.6899
>T174279 WP_000525008.1 NZ_CP062322:1175650-1176111 [Staphylococcus aureus]
MGLYEETLIQHDYIEIREADVLPDNLDGVWLGDLILIKRGLSDREKAGILFEELAHNKLTYGDIADYSNFNNRKFENYAR
RHGFISAVPLREIVEAHNYGVRNLYELSEYLQLSEEYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI
MGLYEETLIQHDYIEIREADVLPDNLDGVWLGDLILIKRGLSDREKAGILFEELAHNKLTYGDIADYSNFNNRKFENYAR
RHGFISAVPLREIVEAHNYGVRNLYELSEYLQLSEEYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI
Download Length: 462 bp
>T174279 NZ_CP080626:3262947-3263363 [Pseudomonas sp. S11A 273]
ATGCTCAAGTACATGCTTGATACCAACATCTGCATTTTTACCCTGAAAAACAAACCTCAAGCGATACGTGAAGCATTCAA
CCGCCATCATGGCCAACTCTGCATCAGTACCATTACGCTGATGGAGTTGATCTACGGTGCAGAAAAATCTGCCGCTGCCG
AACGCAATCTGGCCGTGGTCGAAGGCTTTGCCGCTCGCCTGGAGGTCCTCAGCTACGACAGTCATGCAGCGGCACATAGC
GGCCAGCTACGCGCGGAACTGGCCAGGGCTGGAACACCAATTGGCCCCTATGACCAGATGATCGCGGGCCATGCAAGGTC
GCTGGGGCTGCTGTTGGTCACCAACAATATGCGCGAGTTCCAGCGAGTGCCTGGGCTACGCGTAGAGGATTGGCTCAATT
CCTCTGTCCAGCTGTAG
ATGCTCAAGTACATGCTTGATACCAACATCTGCATTTTTACCCTGAAAAACAAACCTCAAGCGATACGTGAAGCATTCAA
CCGCCATCATGGCCAACTCTGCATCAGTACCATTACGCTGATGGAGTTGATCTACGGTGCAGAAAAATCTGCCGCTGCCG
AACGCAATCTGGCCGTGGTCGAAGGCTTTGCCGCTCGCCTGGAGGTCCTCAGCTACGACAGTCATGCAGCGGCACATAGC
GGCCAGCTACGCGCGGAACTGGCCAGGGCTGGAACACCAATTGGCCCCTATGACCAGATGATCGCGGGCCATGCAAGGTC
GCTGGGGCTGCTGTTGGTCACCAACAATATGCGCGAGTTCCAGCGAGTGCCTGGGCTACGCGTAGAGGATTGGCTCAATT
CCTCTGTCCAGCTGTAG
Antitoxin
Download Length: 105 a.a. Molecular weight: 12063.56 Da Isoelectric Point: 6.4736
>AT174279 WP_000333630.1 NZ_CP062322:1175323-1175637 [Staphylococcus aureus]
MCFSKRMKQSREKQGMTLAELGRKIGKTEATVQRYESGNIKNLKNDTIESIATALNVNPAYLMGWVEENDDEVQHRAAHL
EGELTDDEWQRVLDYADYIRSKRK
MCFSKRMKQSREKQGMTLAELGRKIGKTEATVQRYESGNIKNLKNDTIESIATALNVNPAYLMGWVEENDDEVQHRAAHL
EGELTDDEWQRVLDYADYIRSKRK
Download Length: 315 bp
>AT174279 NZ_CP080626:3262716-3262946 [Pseudomonas sp. S11A 273]
ATGGAGCAAGGTGCGGTCTTCAAGAGCAATCGCAGCCAAGCTGTACGCTTGCCCAAATCCGTAGCACTTCCAGAGGATGT
CAAACGCGTGGATGTCGTCGCAGTGGGTCGAACCCGAATCATTTCCCCCGCCGGTGAAACCTGGGACAGCTGGTTTGAAG
GCCCAAGCGTCAGTGCCGACTTCATGGCCGAACGCGAGCAGCCCACCGATCAGGAGCGCGAGGGTTTCTGA
ATGGAGCAAGGTGCGGTCTTCAAGAGCAATCGCAGCCAAGCTGTACGCTTGCCCAAATCCGTAGCACTTCCAGAGGATGT
CAAACGCGTGGATGTCGTCGCAGTGGGTCGAACCCGAATCATTTCCCCCGCCGGTGAAACCTGGGACAGCTGGTTTGAAG
GCCCAAGCGTCAGTGCCGACTTCATGGCCGAACGCGAGCAGCCCACCGATCAGGAGCGCGAGGGTTTCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|