Detailed information of TA system TA174165

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): relBE/RelE(toxin)
• Location: 2323765..2324245
• Replicon: chromosome
• Accession: NZ_CP062253
• Organism: Pseudomonas gozinkensis strain IzPS32d

Toxin (Protein)

• Gene name: relE
• Uniprot ID: -
• Locus tag: IHQ43_RS10405
• Protein ID: WP_192564253.1
• Coordinates: 2323765..2324049 (-)
• Length: 95 a.a.

Antitoxin (Protein)

• Gene name: relB
• Uniprot ID: -
• Locus tag: IHQ43_RS10410
• Protein ID: WP_192564254.1
• Coordinates: 2324039..2324245 (-)
• Length: 69 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Toxin-antitoxin system, RelE/ParE toxin family (3-88)

Antitoxin

No domain identified.

Sequences

Toxin

Protein

• Length: 95 a.a.
• Molecular weight: 10928.79 Da
• Isoelectric Point: 10.9931

>T174165 WP_192564253.1 NZ_CP062253:c2324049-2323765 [Pseudomonas gozinkensis]
MQIKWRPKARVELSKILKYIGERNFVAATALHKPVVKTTSALPWHPHLYRKGRSPGTREIVVSPNYLVVYQVADRIEIVS
ILHARQEYPRRDPS

Nucleotide

• Length: 285 bp

>T174165 NZ_CP080564:1821242-1821337 [Staphylococcus aureus]
GTGATGCTTATTTTCGTTCACATCATAGCACCAGTCATCAGTGGCTGTGCCATTGCGTTTTTTTCTTATTGGCTAAGTAG
ACGCAATACAAAATAG

Antitoxin

Protein

• Length: 69 a.a.
• Molecular weight: 7552.46 Da
• Isoelectric Point: 3.9012

>AT174165 WP_192564254.1 NZ_CP062253:c2324245-2324039 [Pseudomonas gozinkensis]
MIDPSLIDPLCPVVSDLAPEEQAASYDRWFRAEVQASLDDPRPSIPHEQVIAEINALMESMRKSADAD

Nucleotide

• Length: 207 bp

>AT174165 NZ_CP080564:c1821428-1821365 [Staphylococcus aureus]
AACGAAAATAAGTATTTACTTATACACCAATAAAAATCCCCTCACTATTTGCGGTAGTGAGGGG