Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 448095..448736 Replicon chromosome
Accession NZ_CP061519
Organism Acinetobacter baumannii strain CFSAN093708

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag FQZ17_RS02175 Protein ID WP_000607077.1
Coordinates 448347..448736 (+) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag FQZ17_RS02170 Protein ID WP_011860336.1
Coordinates 448095..448340 (+) Length 82 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FQZ17_RS02150 443599..444606 + 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -
FQZ17_RS02155 444625..445002 + 378 WP_001216380.1 50S ribosomal protein L17 -
FQZ17_RS02160 445184..446674 + 1491 WP_000415125.1 NAD(P)/FAD-dependent oxidoreductase -
FQZ17_RS02165 446723..447895 - 1173 WP_001190542.1 acyl-CoA dehydrogenase family protein -
FQZ17_RS02170 448095..448340 + 246 WP_011860336.1 succinate dehydrogenase assembly factor 2 Antitoxin
FQZ17_RS02175 448347..448736 + 390 WP_000607077.1 membrane protein Toxin
FQZ17_RS02180 449506..450591 + 1086 WP_000049106.1 hypothetical protein -
FQZ17_RS02185 450669..451235 + 567 WP_000651538.1 rhombosortase -
FQZ17_RS02190 451423..453618 + 2196 WP_001158906.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(6-78)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15552.88 Da        Isoelectric Point: 10.4313

>T172677 WP_000607077.1 NZ_CP061519:448347-448736 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

>T172677 NZ_CP079862:2372209-2372634 [Frankia sp. ArI3]
GTGATCTACCTGGATTCGGCGGCAGTAGTGAAACTTGTCGTGGCCGAACCTGAAAGCCCCGCGCTTGTTGACTGGCTCAA
CGTCCGCGACGCCCTACCACGTTTCACCTCCACCCTGGCGGAGGTGGAGGTGACGCGCGCGATCAGGCGAGCCGCCCCGG
AAGCACTCGGGCGCGTGCCGCGAGTACTGGACCGGATGTACCGCCTGGAAATCGATGCCCACGTGCGCGCCGTCGCGGCC
GCCTTTGATGACCCGCTCCTACGGTCTCCCGACGCCATTCACCTCGCTACCGCCCTTCGGCTGTCCGACGAGAACGACAC
TCGGATGGAGGCGTTTGTCACCTACGACAAGCGCCTTCTCGAAGCGGCGCGCCGAGCCGATCTCCCGACCGCGGCGCCGG
GGCCGCACTCCGCTGCGGGGAGCTGA

Antitoxin


Download         Length: 82 a.a.        Molecular weight: 9842.27 Da        Isoelectric Point: 4.9001

>AT172677 WP_011860336.1 NZ_CP061519:448095-448340 [Acinetobacter baumannii]
MTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLKHYVH
G

Download         Length: 246 bp

>AT172677 NZ_CP079862:2371934-2372212 [Frankia sp. ArI3]
GTGGACAGGGTCGGGGTGCGGGAACTCAATCAGAGCACCAGCCAGGTCATCGACCGGGTTCGGCGCGGAGAGACGATCGA
GGTGACCGACCGCGGGCGTCCGGTTGCGCGGCTGGTCCCCATCGGCCGTGGCACAGCAGCGCTCGACCGCCTTGTGACGG
AGGGCCGCGCGATACCGCCGGCGACGGAGGGGCCGGTGCCCATGCCGCCGCTTCTTGGCGACCCCGCCGTCAGCGCGACC
AACGATCTGATCGCCATGCGGGACGAGGAACGCTGGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References