Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/ParE-RelB |
| Location | 994742..995245 | Replicon | chromosome |
| Accession | NZ_CP061280 | ||
| Organism | Mannheimia bovis strain ZY190616 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | ICJ55_RS05085 | Protein ID | WP_188157593.1 |
| Coordinates | 994742..994987 (-) | Length | 82 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | - |
| Locus tag | ICJ55_RS05090 | Protein ID | WP_188157594.1 |
| Coordinates | 994997..995245 (-) | Length | 83 a.a. |
Genomic Context
Location: 990339..990974 (636 bp)
Type: Others
Protein ID: WP_188157588.1
Type: Others
Protein ID: WP_188157588.1
Location: 991019..992074 (1056 bp)
Type: Others
Protein ID: WP_188157589.1
Type: Others
Protein ID: WP_188157589.1
Location: 992074..992706 (633 bp)
Type: Others
Protein ID: WP_188157590.1
Type: Others
Protein ID: WP_188157590.1
Location: 992715..993398 (684 bp)
Type: Others
Protein ID: WP_188157591.1
Type: Others
Protein ID: WP_188157591.1
Location: 993658..994614 (957 bp)
Type: Others
Protein ID: WP_188157592.1
Type: Others
Protein ID: WP_188157592.1
Location: 997001..998302 (1302 bp)
Type: Others
Protein ID: WP_188157596.1
Type: Others
Protein ID: WP_188157596.1
Location: 998426..999835 (1410 bp)
Type: Others
Protein ID: WP_188157597.1
Type: Others
Protein ID: WP_188157597.1
Location: 994742..994987 (246 bp)
Type: Toxin
Protein ID: WP_188157593.1
Type: Toxin
Protein ID: WP_188157593.1
Location: 994997..995245 (249 bp)
Type: Antitoxin
Protein ID: WP_188157594.1
Type: Antitoxin
Protein ID: WP_188157594.1
Location: 995332..996786 (1455 bp)
Type: Others
Protein ID: WP_188157595.1
Type: Others
Protein ID: WP_188157595.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ICJ55_RS05060 | 990339..990974 | + | 636 | WP_188157588.1 | trimeric intracellular cation channel family protein | - |
| ICJ55_RS05065 | 991019..992074 | + | 1056 | WP_188157589.1 | electron transport complex subunit RsxD | - |
| ICJ55_RS05070 | 992074..992706 | + | 633 | WP_188157590.1 | electron transport complex subunit RsxG | - |
| ICJ55_RS05075 | 992715..993398 | + | 684 | WP_188157591.1 | electron transport complex subunit E | - |
| ICJ55_RS05080 | 993658..994614 | + | 957 | WP_188157592.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| ICJ55_RS05085 | 994742..994987 | - | 246 | WP_188157593.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| ICJ55_RS05090 | 994997..995245 | - | 249 | WP_188157594.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
| ICJ55_RS05095 | 995332..996786 | - | 1455 | WP_188157595.1 | aminoacyl-histidine dipeptidase | - |
| ICJ55_RS05100 | 997001..998302 | + | 1302 | WP_188157596.1 | transferrin-binding protein-like solute binding protein | - |
| ICJ55_RS05105 | 998426..999835 | + | 1410 | WP_188157597.1 | DUF560 domain-containing protein | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 82 a.a. Molecular weight: 9416.13 Da Isoelectric Point: 9.5421
>T172271 WP_188157593.1 NZ_CP061280:c994987-994742 [Mannheimia bovis]
MVYSIKVHEDFVAELNKLDPTIKQQLRKKLDKVVENPHIPKNRLSGELHNCYKIKLRKAGVMLVYQLNDDETCILLLTVG
R
MVYSIKVHEDFVAELNKLDPTIKQQLRKKLDKVVENPHIPKNRLSGELHNCYKIKLRKAGVMLVYQLNDDETCILLLTVG
R
Download Length: 246 bp
>T172271 NZ_CP079712:c143228-142947 [Pseudomonas aeruginosa]
ATGAGCCTGAAGTGGACCCGCAAGGCGGCCGCCGACCTGGACGCCATCTACGACCATTACGTCGTGCTGATCGGCCCGGA
AAAAGCTCTGAAAGCCGTTCAGGACATCGTCGAGCAGGTGAAACCGCTGCAGCAGGTAGCCAACCAGGGGGCAGGGCGGC
CCAGCGAGGTGCCAGGCGTACGCACCCTGACCCTGGAGCGCTGGCCGTTCAGCGCCCCGTTTCGGGTTAAAGGCAAGGAA
ATCCAGATTTTGCGCATCGACAGAGTCGAAATTACCCCCTGA
ATGAGCCTGAAGTGGACCCGCAAGGCGGCCGCCGACCTGGACGCCATCTACGACCATTACGTCGTGCTGATCGGCCCGGA
AAAAGCTCTGAAAGCCGTTCAGGACATCGTCGAGCAGGTGAAACCGCTGCAGCAGGTAGCCAACCAGGGGGCAGGGCGGC
CCAGCGAGGTGCCAGGCGTACGCACCCTGACCCTGGAGCGCTGGCCGTTCAGCGCCCCGTTTCGGGTTAAAGGCAAGGAA
ATCCAGATTTTGCGCATCGACAGAGTCGAAATTACCCCCTGA
Antitoxin
Download Length: 83 a.a. Molecular weight: 9320.68 Da Isoelectric Point: 4.7085
>AT172271 WP_188157594.1 NZ_CP061280:c995245-994997 [Mannheimia bovis]
MANLNIRVDDNVKQQAFLAFDNLGISPSDAIRTFLAYVADTGKMPIKQIIVSDEDAELYNIVKKRLNEPEKIKNTTLYEL
FS
MANLNIRVDDNVKQQAFLAFDNLGISPSDAIRTFLAYVADTGKMPIKQIIVSDEDAELYNIVKKRLNEPEKIKNTTLYEL
FS
Download Length: 249 bp
>AT172271 NZ_CP079712:c143452-143225 [Pseudomonas aeruginosa]
ATGAGCACCGTAGTCTCGTTCCGCGCCGATGACGCCCTGGTCGCGGCCCTCGACGAACTGGCCCGCGCCACCCACCGCGA
CCGACCCTACCACCTGCGGCAGGCGCTCGCGCAGTACCTGGAAAGGCAGCAGTGGCAGGTCGCTGCCATCGATGAAGGCT
TGGCCGATGCCAATGCCGGTCGCCTGCTGGAACACATCGAGATCGAGAAGCGCTGGGGGCTGCAATGA
ATGAGCACCGTAGTCTCGTTCCGCGCCGATGACGCCCTGGTCGCGGCCCTCGACGAACTGGCCCGCGCCACCCACCGCGA
CCGACCCTACCACCTGCGGCAGGCGCTCGCGCAGTACCTGGAAAGGCAGCAGTGGCAGGTCGCTGCCATCGATGAAGGCT
TGGCCGATGCCAATGCCGGTCGCCTGCTGGAACACATCGAGATCGAGAAGCGCTGGGGGCTGCAATGA