Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tacAT/DUF1778(antitoxin)
Location 3165242..3166041 Replicon chromosome
Accession NZ_CP061080
Organism Mesirhizobium sp. NIBR3 strain N3

Toxin (Protein)


Gene name TacT2 Uniprot ID -
Locus tag IAI54_RS14795 Protein ID WP_187967934.1
Coordinates 3165242..3165733 (-) Length 164 a.a.

Antitoxin (Protein)


Gene name TacA2 Uniprot ID -
Locus tag IAI54_RS14800 Protein ID WP_210321129.1
Coordinates 3165730..3166041 (-) Length 104 a.a.

Genomic Context

IAI54_RS14785IAI54_RS14790IAI54_RS14810IAI54_RS14780IAI54_RS14795IAI54_RS14800IAI54_RS14805IAI54_RS14815IAI54_RS14820IAI54_RS14825
Location: 3162481..3163668 (1188 bp)
Type: Others
Protein ID: WP_187967932.1
Location: 3163762..3165234 (1473 bp)
Type: Others
Protein ID: WP_187967933.1
Location: 3166821..3167213 (393 bp)
Type: Others
Protein ID: WP_187967937.1
Location: 3161177..3162262 (1086 bp)
Type: Others
Protein ID: WP_187967931.1
Location: 3165242..3165733 (492 bp)
Type: Toxin
Protein ID: WP_187967934.1
Location: 3165730..3166041 (312 bp)
Type: Antitoxin
Protein ID: WP_210321129.1
Location: 3166084..3166689 (606 bp)
Type: Others
Protein ID: WP_187967936.1
Location: 3167217..3168251 (1035 bp)
Type: Others
Protein ID: WP_187967938.1
Location: 3168199..3169128 (930 bp)
Type: Others
Protein ID: WP_187973164.1
Location: 3169146..3170336 (1191 bp)
Type: Others
Protein ID: WP_187967939.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
IAI54_RS147803161177..3162262-1086WP_187967931.12'-deoxycytidine 5'-triphosphate deaminase-
IAI54_RS147853162481..3163668+1188WP_187967932.1O-succinylhomoserine sulfhydrylase-
IAI54_RS147903163762..3165234+1473WP_187967933.1hypothetical protein-
IAI54_RS147953165242..3165733-492WP_187967934.1GNAT family N-acetyltransferaseToxin
IAI54_RS148003165730..3166041-312WP_210321129.1DUF1778 domain-containing proteinAntitoxin
IAI54_RS148053166084..3166689-606WP_187967936.1CDP-alcohol phosphatidyltransferase family protein-
IAI54_RS148103166821..3167213+393WP_187967937.1Co2+/Mg2+ efflux protein ApaG-
IAI54_RS148153167217..3168251-1035WP_187967938.1Hsp33 family molecular chaperone-
IAI54_RS148203168199..3169128-930WP_187973164.1ornithine carbamoyltransferase-
IAI54_RS148253169146..3170336-1191WP_187967939.1aspartate aminotransferase family protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(42-144)

Antitoxin

Vibrio phage ICP1, Orf50

(21-96)


Sequences

Toxin        


Download         Length: 164 a.a.        Molecular weight: 17515.99 Da        Isoelectric Point: 9.0370

>T172033 WP_187967934.1 NZ_CP061080:c3165733-3165242 [Mesirhizobium sp. NIBR3]
VSLQAPGPLGEAHDFAAFASGADGLDDWLKRRARFNQASGASRTYVVADGTRVVGYCALASGAVVLSAASSRISRNMPDP
IPIVVFGRLAVDREWQGRGLGSAMFRDAAHRVRRAADTIGIRGMLVHAISEDARQFYLSLGFEPSMLDPMTLLVRLADIE
TAR

Download         Length: 492 bp

>T172033 NZ_CP079156:c245372-244890 [Klebsiella pneumoniae subsp. pneumoniae]
ATGGGAATGAGAGCGCCTGAATCCCTGACGGCTGAACATAACATCGCTGAGTTCTGCTGCCAGGAGCCTGCCCTTAATGA
GTGGTTAAAGAAGAAGGCTCTCAGAAACCACAGTACCGGCATTTCCCGTGTCTATGTCGTCTGCGCAGAAAACACTAACC
GGGTCATCGGTTATTATTGTTTATCTTCGGGTAGCGTCCACCGTAACACAGTGCCTGGGGCCTATAGACGCAACGCGCCT
GATGTCATTCCAGTCATTGTTTTGGGACGGCTTGCCATCGACCAGGCCTGGGCCGGGAATGGGCTTGGTGCCGCACTTCT
TAAGGATGCTATATACCGTACGCAAAACATAGCCTTTCAGGTCGGGGTGAGAGCACTGGCCGTGCATGCGCTGAATGAAG
AAGTTAAATGTTTTTACACCCGTTTTGGCTTTGAGCCTTCCATAGTCAACACGCTGACATTGTTATTCCCGATAAAAGTC
TGA

Antitoxin


Download         Length: 104 a.a.        Molecular weight: 11738.39 Da        Isoelectric Point: 9.3372

>AT172033 WP_210321129.1 NZ_CP061080:c3166041-3165730 [Mesirhizobium sp. NIBR3]
MTMQPTSKPTEKVSRPVRDTLNLRIRPDLRSLIDQAAELAGKSRSDFVLEASRRAAEETLRDRTLWLADPDAFAAFCERL
DLPSAPSERLRHVLARKAPWEQP

Download         Length: 312 bp

>AT172033 NZ_CP079156:c245641-245363 [Klebsiella pneumoniae subsp. pneumoniae]
ATGAAACCAGACGTTCGTGAAGCTCCGATTAATATCCGGGCCAAAACATCACAGCGTGACCTGATCGACATGGCCGCAAG
CCTGGTCTCAAAATCACGGACTGATTTTATGCTTGAGGTTGCCTGCAGGGAGGCACAGGACATTCTGCTTGATCAACGCC
TGTTCCTCCTCAATGACAATCAGTTTGAGGCGTTTATTGAAGAGCTTGACGCCCCAATAACGCCGGAGCGCCAGGCGCGA
ATCGATAACCTGATGAACCGCAAATCACCATGGGAATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References