Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) parDE/RHH(antitoxin)
Location 3408767..3409301 Replicon chromosome
Accession NZ_CP058278
Organism Flavobacterium sp. P2-65

Toxin (Protein)


Gene name parE Uniprot ID -
Locus tag HW120_RS15350 Protein ID WP_177735144.1
Coordinates 3409008..3409301 (+) Length 98 a.a.

Antitoxin (Protein)


Gene name parD Uniprot ID -
Locus tag HW120_RS15345 Protein ID WP_177735142.1
Coordinates 3408767..3409015 (+) Length 83 a.a.

Genomic Context

HW120_RS15310HW120_RS15330HW120_RS15335HW120_RS15340HW120_RS15345HW120_RS15350HW120_RS15355HW120_RS15315HW120_RS15320HW120_RS15325HW120_RS15360HW120_RS15365HW120_RS15370
Location: 3403847..3404269 (423 bp)
Type: Others
Protein ID: WP_177735128.1
Location: 3406901..3407311 (411 bp)
Type: Others
Protein ID: WP_177735136.1
Location: 3407453..3407923 (471 bp)
Type: Others
Protein ID: WP_177735138.1
Location: 3407961..3408563 (603 bp)
Type: Others
Protein ID: WP_177735140.1
Location: 3408767..3409015 (249 bp)
Type: Antitoxin
Protein ID: WP_177735142.1
Location: 3409008..3409301 (294 bp)
Type: Toxin
Protein ID: WP_177735144.1
Location: 3409371..3410297 (927 bp)
Type: Others
Protein ID: WP_177735146.1
Location: 3404572..3405351 (780 bp)
Type: Others
Protein ID: WP_177735130.1
Location: 3405468..3406103 (636 bp)
Type: Others
Protein ID: WP_177735132.1
Location: 3406172..3406717 (546 bp)
Type: Others
Protein ID: WP_177735134.1
Location: 3410340..3411326 (987 bp)
Type: Others
Protein ID: WP_177735148.1
Location: 3411537..3412061 (525 bp)
Type: Others
Protein ID: WP_177735150.1
Location: 3412130..3413023 (894 bp)
Type: Others
Protein ID: WP_177735152.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
HW120_RS153103403847..3404269+423WP_177735128.1hypothetical protein-
HW120_RS153153404572..3405351-780WP_177735130.1hypothetical protein-
HW120_RS153203405468..3406103-636WP_177735132.1hypothetical protein-
HW120_RS153253406172..3406717-546WP_177735134.1hypothetical protein-
HW120_RS153303406901..3407311+411WP_177735136.1hypothetical protein-
HW120_RS153353407453..3407923+471WP_177735138.1hypothetical protein-
HW120_RS153403407961..3408563+603WP_177735140.1hypothetical protein-
HW120_RS153453408767..3409015+249WP_177735142.1type II toxin-antitoxin system ParD family antitoxinAntitoxin
HW120_RS153503409008..3409301+294WP_177735144.1type II toxin-antitoxin system RelE/ParE family toxinToxin
HW120_RS153553409371..3410297+927WP_177735146.1hypothetical protein-
HW120_RS153603410340..3411326-987WP_177735148.1amidase-
HW120_RS153653411537..3412061-525WP_177735150.1tail fiber protein-
HW120_RS153703412130..3413023-894WP_177735152.1tail fiber domain-containing protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(6-93)

Antitoxin

Antitoxin ParD

(1-78)


Sequences

Toxin        


Download         Length: 98 a.a.        Molecular weight: 11393.93 Da        Isoelectric Point: 5.1099

>T166429 WP_177735144.1 NZ_CP058278:3409008-3409301 [Flavobacterium sp. P2-65]
MAKFYLTNKAVEDLGDIWNYTVEAWSENQAEIYYSLIIDSFQELASKPNQGKSYDVVERNVLGYKTGQHVIFYRIVTERE
IEVIRISHGMMDMKNHL

Download         Length: 294 bp

>T166429 NZ_CP074149:3730606-3730905 [Enterobacter sp. JBIWA008]
ATGATTAGTTATTTTCGGGATCAATGGCTTGAGGATTTTTTTCTTTACGGCAGATCGAGCAACGTTATTCCTTCAAATCT
GGAAACAGCGCTTGCGAGAAAGCTCGATATCATCAGGGCAGCAACCTCGCACAGGGATTTGCGATCGCCACCCGGCAATA
TGTATGAAGCATTGAATCCTCCGCTGAAGGGCTATTCCTCAATCCGGGTTAACAGGCAATACAGGCTCGTATTTCGCTGG
ACAGAGGGTAAAGCAGAAGATCTCTACCTCTCTCCACACAAGTACACGCAACACAAATGA

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9171.32 Da        Isoelectric Point: 10.0121

>AT166429 WP_177735142.1 NZ_CP058278:3408767-3409015 [Flavobacterium sp. P2-65]
MGRNTSISLGPHFESFIESTVSKGRFSNASEVVRAGLRLLEEEENRITVLRNAIQEGIESGRAENFDPKKHLETLKSKKK
NG

Download         Length: 249 bp

>AT166429 NZ_CP074149:3730916-3731263 [Enterobacter sp. JBIWA008]
ATGACACTTCAACAGGCACTCCGCAAACCCACCACGCCGGGCGACGTGTTGCAGTATGAGTATCTTGAACCGCTCAATCT
GAAAATCAGCGATCTGGCGGAGATGCTCAATGTTCACCGCAACACCATCAGCGCGCTGGTCAATAACAATCGCAAGCTTA
CTGCCGATATGGCGATCAAACTGGCAAAAGCCTTTGATACCACGATTGAATTTTGGCTGAACTTACAGCTGAACGTCGAT
ATCTGGGAAGCACAATCTAACTCCAGGACGCAGGAGGAGCTAAGCCGTATAAAGACCGTTGCGGACGTCATGGCTAAGCG
AAAATCTGGCCAGCCGGATGTAGCCTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References