Detailed information of TA system
Overview
TA module
| Type | VIII | Classification (family/domain) | SdsR-RyeA/- |
| Location | 3962986..3963129 | Replicon | chromosome |
| Accession | NZ_CP056776 | ||
| Organism | Enterobacter cloacae strain DSM 30054 | ||
Toxin (RNA)
| Gene name | SdsR | ||
| Locus tag | - | ||
| Coordinates | 3963021..3963124 (+) |
Antitoxin (RNA)
| Gene name | RyeA | ||
| Locus tag | - | ||
| Coordinates | 3962986..3963129 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HWQ16_RS19335 | 3959470..3960132 | - | 663 | WP_013096100.1 | exodeoxyribonuclease X | - |
| HWQ16_RS19340 | 3960156..3960806 | - | 651 | WP_013096101.1 | carbon-nitrogen hydrolase family protein | - |
| HWQ16_RS19345 | 3960916..3961146 | - | 231 | WP_013096102.1 | DNA polymerase III subunit theta | - |
| HWQ16_RS19350 | 3961284..3961655 | + | 372 | WP_013096103.1 | CopC domain-containing protein YobA | - |
| HWQ16_RS19355 | 3961657..3962526 | + | 870 | WP_013096104.1 | copper homeostasis membrane protein CopD | - |
| HWQ16_RS19360 | 3962543..3962881 | + | 339 | WP_013096105.1 | YebY family protein | - |
| - | 3962986..3963129 | - | 144 | - | - | Antitoxin |
| - | 3963021..3963124 | + | 104 | - | - | Toxin |
| HWQ16_RS19365 | 3964306..3965153 | - | 848 | Protein_3762 | benzoate transporter | - |
| HWQ16_RS19370 | 3965943..3966884 | - | 942 | WP_013096111.1 | VirK/YbjX family protein | - |
| HWQ16_RS19375 | 3967051..3967695 | + | 645 | WP_013096112.1 | protein-serine/threonine phosphatase | - |
| HWQ16_RS19380 | 3967729..3967968 | - | 240 | WP_013096113.1 | YebV family protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 104 bp
>T164201 NZ_CP056776:3963021-3963124 [Enterobacter cloacae]
GGCAAGGCGACTTAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATAC
AGGAATCGTATTCGGTCTCTTTTT
GGCAAGGCGACTTAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATAC
AGGAATCGTATTCGGTCTCTTTTT
Antitoxin
Download Length: 144 bp
>AT164201 NZ_CP056776:c3963129-3962986 [Enterobacter cloacae]
CAGATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAGTT
GGCATTAATGCAGGCTAAGTCGCCTTGCCTTTTAAGAATAGATGACGACGCCAGGTTTTCCAGT
CAGATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAGTT
GGCATTAATGCAGGCTAAGTCGCCTTGCCTTTTAAGAATAGATGACGACGCCAGGTTTTCCAGT
