Detailed information of TA system
Overview
TA module
| Type | VIII | Classification (family/domain) | SdsR-RyeA/- |
| Location | 2075932..2075970 | Replicon | chromosome |
| Accession | NZ_CP056260 | ||
| Organism | Klebsiella aerogenes strain RHBSTW-00898 | ||
Toxin (RNA)
| Gene name | SdsR | ||
| Locus tag | - | ||
| Coordinates | 2075932..2075962 (+) |
Antitoxin (RNA)
| Gene name | RyeA | ||
| Locus tag | - | ||
| Coordinates | 2075932..2075970 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV316_RS10010 | 2071987..2074254 | + | 2268 | WP_050595190.1 | right-handed parallel beta-helix repeat-containing protein | - |
| HV316_RS10015 | 2074254..2075687 | + | 1434 | WP_032716195.1 | hypothetical protein | - |
| - | 2075932..2075962 | + | 31 | - | - | Toxin |
| - | 2075932..2075970 | - | 39 | - | - | Antitoxin |
| HV316_RS10020 | 2076090..2077037 | - | 948 | WP_032706245.1 | spore coat U domain-containing protein | - |
| HV316_RS10025 | 2077056..2079380 | - | 2325 | WP_032705949.1 | fimbrial biogenesis outer membrane usher protein | - |
| HV316_RS10030 | 2079383..2080132 | - | 750 | WP_015366013.1 | molecular chaperone | - |
| HV316_RS10035 | 2080150..2080668 | - | 519 | WP_015366014.1 | spore coat U domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 2028023..2088575 | 60552 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
