163168

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) PP_4151-4152/excise(antitoxin)
Location 77438..78459 Replicon chromosome
Accession NZ_CP056260
Organism Klebsiella aerogenes strain RHBSTW-00898

Toxin (Protein)


Gene name PP_4152 Uniprot ID A0A0G9UXE3
Locus tag HV316_RS00390 Protein ID WP_032706547.1
Coordinates 77884..78459 (+) Length 192 a.a.

Antitoxin (Protein)


Gene name PP_4151 Uniprot ID A0A0G9R618
Locus tag HV316_RS00385 Protein ID WP_015369110.1
Coordinates 77438..77884 (+) Length 149 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HV316_RS00360 72959..73738 + 780 WP_015369105.1 MBL fold metallo-hydrolase -
HV316_RS00365 73760..74713 + 954 WP_032706577.1 helix-turn-helix domain-containing protein -
HV316_RS00370 74710..75759 - 1050 WP_015369107.1 NAD(P)-dependent alcohol dehydrogenase -
HV316_RS00375 75917..76219 - 303 WP_015369108.1 antibiotic biosynthesis monooxygenase -
HV316_RS00380 76220..77227 - 1008 WP_015369109.1 zinc-binding alcohol dehydrogenase family protein -
HV316_RS00385 77438..77884 + 447 WP_015369110.1 helix-turn-helix domain-containing protein Antitoxin
HV316_RS00390 77884..78459 + 576 WP_032706547.1 PIN domain-containing protein Toxin
HV316_RS00395 78764..79960 + 1197 WP_015369112.1 hypothetical protein -
HV316_RS00400 80137..81174 - 1038 WP_032706544.1 virulence RhuM family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

PIN domain

(8-115)

Antitoxin

SinI-like, DNA-binding domain

(79-126)


Sequences

Toxin        


Download         Length: 192 a.a.        Molecular weight: 21688.29 Da        Isoelectric Point: 6.2900

>T163168 WP_032706547.1 NZ_CP056260:77884-78459 [Klebsiella aerogenes]
MRHSPYPVILDACVLYPARLRDLLMHLGIAGLYQPKWSRFIHDEWCRNLLINRPDIAPEALRRTVDLMNAALPDANVTGF
AGLINGLVLPDPDDRHVLAAAIRAKAEIIVTLNHKDFPAESLLPFEIETLHPDVFISDLFDLNHALALEAVRRQRQSLKH
PPMTVDEFLEMLLKQGLPMTVKELANYQYAI

Download         Length: 576 bp

>T163168 NZ_CP072422:4024372-4024590 [Klebsiella pneumoniae]
ATGTCTGATAAGCCATTAACTAAAACAGACTATTTGATGCGCTTACGTCGTTGCCAGACAATTGACACGCTGGAGCGCGT
CATTGAAAAAAATAAATATGAACTGTCTGATAATGAGCTGGCGGTATTTTACTCAGCTGCCGACCATCGTCTGGCGGAAC
TGACCATGAATAAGCTATACGATAAAATCCCGACTTCTGTCTGGAAATTTATCCGCTAA

Antitoxin


Download         Length: 149 a.a.        Molecular weight: 16699.26 Da        Isoelectric Point: 6.2257

>AT163168 WP_015369110.1 NZ_CP056260:77438-77884 [Klebsiella aerogenes]
MTKLNLPDPLESELAQRGQRELAAYLSTHLETQRIAIVGEDDKTHTIELPTSALTMLMEILGELACGNAVQIVPVHAELT
TQEAANILNVSRPHMVKLLEARKLPFHKTGRHRRVLFADLMEYKKRREQESLDAMQALADQAQDLGMY

Download         Length: 447 bp

>AT163168 NZ_CP072422:4023971-4024345 [Klebsiella pneumoniae]
ATGGACGAATACTCGCCAAAAAGACATGATATTGCACAGCTACGCTTTCTCTGCGAAACGCTGTATCATGACTGCCTTGC
AAACCTGGAAGAGAGCAACCATGGCTGGGTCAACGACCCGACGTCGGCTGTCAATCTCCAGTTAAATGAATTGATCGAGC
ACATTGCCACATTCGCTCTTAATTATAAAATTAAGTATGCAGAGGATAATAAGCTGATCGCTCAGGTTGACGAATATCTG
GACGACACTTTTACGTTGTTCAGTAACTACGGCATTAACTCTACGGATTTGCAAAAGTGGAAAAAATCCGGTAACCGACT
ATTTCGTTGCTTTGTCAACGCCAGCCGGGAAAACCCGGCCAGTCTATCGTGTTAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0G9UXE3

Antitoxin

Source ID Structure
AlphaFold DB A0A0G9R618

References