Detailed information of TA system
Overview
TA module
| Type | VIII | Classification (family/domain) | SdsR-RyeA/- |
| Location | 4555686..4555829 | Replicon | chromosome |
| Accession | NZ_CP055276 | ||
| Organism | Enterobacter mori strain CX01 | ||
Toxin (RNA)
| Gene name | SdsR | ||
| Locus tag | - | ||
| Coordinates | 4555721..4555824 (+) |
Antitoxin (RNA)
| Gene name | RyeA | ||
| Locus tag | - | ||
| Coordinates | 4555686..4555829 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUI94_RS21480 (HUI94_21450) | 4552169..4552831 | - | 663 | WP_010432611.1 | exodeoxyribonuclease X | - |
| HUI94_RS21485 (HUI94_21455) | 4552856..4553506 | - | 651 | WP_218400926.1 | carbon-nitrogen hydrolase family protein | - |
| HUI94_RS21490 (HUI94_21460) | 4553617..4553847 | - | 231 | WP_010432616.1 | DNA polymerase III subunit theta | - |
| HUI94_RS21495 (HUI94_21465) | 4553985..4554356 | + | 372 | WP_218402618.1 | CopC domain-containing protein YobA | - |
| HUI94_RS21500 (HUI94_21470) | 4554358..4555227 | + | 870 | WP_042717973.1 | copper homeostasis membrane protein CopD | - |
| HUI94_RS21505 (HUI94_21475) | 4555244..4555582 | + | 339 | WP_010432621.1 | YebY family protein | - |
| - | 4555686..4555829 | - | 144 | - | - | Antitoxin |
| - | 4555721..4555824 | + | 104 | - | - | Toxin |
| HUI94_RS21510 (HUI94_21480) | 4555949..4556929 | - | 981 | WP_218400928.1 | VirK/YbjX family protein | - |
| HUI94_RS21515 (HUI94_21485) | 4557097..4557735 | + | 639 | WP_089598200.1 | protein-serine/threonine phosphatase | - |
| HUI94_RS21520 (HUI94_21490) | 4557770..4558009 | - | 240 | WP_042717979.1 | YebV family protein | - |
| HUI94_RS21525 (HUI94_21495) | 4558114..4559556 | - | 1443 | WP_218400930.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 104 bp
>T162215 NZ_CP055276:4555721-4555824 [Enterobacter mori]
GGCAAGGCGACTTAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATAC
AGGAATCGTATTCGGTCTCTTTTT
GGCAAGGCGACTTAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATAC
AGGAATCGTATTCGGTCTCTTTTT
Antitoxin
Download Length: 144 bp
>AT162215 NZ_CP055276:c4555829-4555686 [Enterobacter mori]
CAGATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAGTT
GGCATTAATGCAGGCTAAGTCGCCTTGCCTTTTAAGAATAGATGACGACGCCAGGTTTTCCAGT
CAGATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAGTT
GGCATTAATGCAGGCTAAGTCGCCTTGCCTTTTAAGAATAGATGACGACGCCAGGTTTTCCAGT
