Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | tacAT/DUF1778(antitoxin) |
| Location | 1135581..1136365 | Replicon | chromosome |
| Accession | NZ_CP055048 | ||
| Organism | Escherichia coli strain SWHEFF_58 | ||
Toxin (Protein)
| Gene name | TacT2 | Uniprot ID | V0T0H9 |
| Locus tag | HUZ70_RS05645 | Protein ID | WP_000613626.1 |
| Coordinates | 1135871..1136365 (+) | Length | 165 a.a. |
Antitoxin (Protein)
| Gene name | TacA2 | Uniprot ID | L4JCW6 |
| Locus tag | HUZ70_RS05640 | Protein ID | WP_001110447.1 |
| Coordinates | 1135581..1135874 (+) | Length | 98 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ70_RS05630 (1130731) | 1130731..1131690 | - | 960 | WP_000846342.1 | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | - |
| HUZ70_RS05635 (1132263) | 1132263..1135448 | + | 3186 | WP_001550951.1 | ribonuclease E | - |
| HUZ70_RS05640 (1135581) | 1135581..1135874 | + | 294 | WP_001110447.1 | DUF1778 domain-containing protein | Antitoxin |
| HUZ70_RS05645 (1135871) | 1135871..1136365 | + | 495 | WP_000613626.1 | GNAT family N-acetyltransferase | Toxin |
| HUZ70_RS05650 (1136460) | 1136460..1137413 | - | 954 | WP_001212768.1 | flagellar hook-associated protein FlgL | - |
| HUZ70_RS05655 (1137425) | 1137425..1139068 | - | 1644 | WP_000096478.1 | flagellar hook-associated protein FlgK | - |
| HUZ70_RS05660 (1139134) | 1139134..1140075 | - | 942 | WP_137503916.1 | flagellar assembly peptidoglycan hydrolase FlgJ | - |
| HUZ70_RS05665 (1140075) | 1140075..1141172 | - | 1098 | WP_001441925.1 | flagellar basal body P-ring protein FlgI | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 165 a.a. Molecular weight: 18084.00 Da Isoelectric Point: 8.2617
>T161205 WP_000613626.1 NZ_CP055048:1135871-1136365 [Escherichia coli]
MIQAPEPLMARHQFTSFCSGVETMDNWLKQRALKNQLAGASRTFVSCDTYSNVLAYYSLASSAVETYVATGRFRRNMPEP
IPVVVLGRLAIDKSLQGQGIGRAMVRDAGLRVLQAAEVIGIRGMLVHALSDQAREFYLRVGFEPSPVDSMILMATLADLQ
ECLK
MIQAPEPLMARHQFTSFCSGVETMDNWLKQRALKNQLAGASRTFVSCDTYSNVLAYYSLASSAVETYVATGRFRRNMPEP
IPVVVLGRLAIDKSLQGQGIGRAMVRDAGLRVLQAAEVIGIRGMLVHALSDQAREFYLRVGFEPSPVDSMILMATLADLQ
ECLK
Download Length: 495 bp
>T161205 NZ_CP071094:582037-582165 [Fusobacterium polymorphum]
ATGTATGAAATTAAGACCACTACTAAATTTGAAAAAGACTTAAAATTAATGAAAAAAAGAGGATATAATTTAAAATTATT
AAAAGAGGTAATTAATATGTTATCTAAAGGAGCTAAAAGCAGATTATAA
ATGTATGAAATTAAGACCACTACTAAATTTGAAAAAGACTTAAAATTAATGAAAAAAAGAGGATATAATTTAAAATTATT
AAAAGAGGTAATTAATATGTTATCTAAAGGAGCTAAAAGCAGATTATAA
Antitoxin
Download Length: 98 a.a. Molecular weight: 11109.69 Da Isoelectric Point: 10.5423
>AT161205 WP_001110447.1 NZ_CP055048:1135581-1135874 [Escherichia coli]
MPAANNIPTRRESLNLRIKPAERDLIDRAAKARGKNRTEFVLEAARAAAEEALIEQRIFRIDSDDYQLFLNRLDQPPAPN
AALRKTMQTPAPWEQKK
MPAANNIPTRRESLNLRIKPAERDLIDRAAKARGKNRTEFVLEAARAAAEEALIEQRIFRIDSDDYQLFLNRLDQPPAPN
AALRKTMQTPAPWEQKK
Download Length: 294 bp
>AT161205 NZ_CP071094:581838-582035 [Fusobacterium polymorphum]
TTGGGACTTAATATATCAGTTGCAATAAATTTATTTCTAAAAAAATGTATAAATGAAAATGGGATGCCATTTGATTTAAA
AATTCCAAATAAAAAAACAATAGAAGCAATGGAAGGAACTAACAAAATATTAAATGGAGATATAGAAAGAAAGTCATATA
AAAATGCTGATGAGTTATTTGAAGATTTAGGTGTGTAA
TTGGGACTTAATATATCAGTTGCAATAAATTTATTTCTAAAAAAATGTATAAATGAAAATGGGATGCCATTTGATTTAAA
AATTCCAAATAAAAAAACAATAGAAGCAATGGAAGGAACTAACAAAATATTAAATGGAGATATAGAAAGAAAGTCATATA
AAAATGCTGATGAGTTATTTGAAGATTTAGGTGTGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|