Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | /HTH_XRE(antitoxin) |
| Location | 1550149..1550946 | Replicon | chromosome |
| Accession | NZ_CP054876 | ||
| Organism | Staphylococcus aureus strain Dresden-275757 | ||
Toxin (Protein)
| Gene name | - | Uniprot ID | A0A641AAS6 |
| Locus tag | HUW54_RS07460 | Protein ID | WP_000525006.1 |
| Coordinates | 1550485..1550946 (+) | Length | 154 a.a. |
Antitoxin (Protein)
| Gene name | - | Uniprot ID | - |
| Locus tag | HUW54_RS07455 | Protein ID | WP_001260486.1 |
| Coordinates | 1550149..1550472 (+) | Length | 108 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUW54_RS07405 | 1545884..1546441 | - | 558 | WP_175528724.1 | DUF2815 family protein | - |
| HUW54_RS07410 | 1546467..1547633 | - | 1167 | WP_000762551.1 | DUF2800 domain-containing protein | - |
| HUW54_RS07415 | 1547630..1547992 | - | 363 | WP_000279446.1 | hypothetical protein | - |
| HUW54_RS07420 | 1548007..1548330 | - | 324 | WP_000175000.1 | hypothetical protein | - |
| HUW54_RS07425 | 1548410..1548571 | - | 162 | WP_001285955.1 | DUF1270 family protein | - |
| HUW54_RS07430 | 1548584..1548847 | - | 264 | WP_001124160.1 | helix-turn-helix domain-containing protein | - |
| HUW54_RS07435 | 1548872..1549087 | - | 216 | WP_001036301.1 | hypothetical protein | - |
| HUW54_RS07440 | 1549142..1549507 | + | 366 | WP_001128433.1 | hypothetical protein | - |
| HUW54_RS07445 | 1549476..1549721 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | - |
| HUW54_RS07450 | 1549737..1549985 | - | 249 | WP_000272861.1 | helix-turn-helix domain-containing protein | - |
| HUW54_RS07455 | 1550149..1550472 | + | 324 | WP_001260486.1 | helix-turn-helix domain-containing protein | Antitoxin |
| HUW54_RS07460 | 1550485..1550946 | + | 462 | WP_000525006.1 | hypothetical protein | Toxin |
| HUW54_RS07465 | 1550963..1551397 | + | 435 | WP_175528725.1 | hypothetical protein | - |
| HUW54_RS07470 | 1551426..1551821 | + | 396 | WP_000449655.1 | hypothetical protein | - |
| HUW54_RS07475 | 1551911..1552057 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| HUW54_RS07480 | 1552054..1552668 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| HUW54_RS07485 | 1552794..1554000 | + | 1207 | Protein_1467 | site-specific integrase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | lukF-PV / lukS-PV | 1502891..1571643 | 68752 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 154 a.a. Molecular weight: 18118.47 Da Isoelectric Point: 4.6915
>T160570 WP_000525006.1 NZ_CP054876:1550485-1550946 [Staphylococcus aureus]
MGLYEETLIQHDYIEIREADVLPDNLDGVWLGDLILIKRGLSDREKAGILFEELAHNKLTYGDIADYSKFNNRKFENYAR
RHGFISAVPLREIVEAYNYGVRNLYELSEYLQLSEEYILEAIEQYKKIYGIGTHYGEYSITFEPLRVYRYKEI
MGLYEETLIQHDYIEIREADVLPDNLDGVWLGDLILIKRGLSDREKAGILFEELAHNKLTYGDIADYSKFNNRKFENYAR
RHGFISAVPLREIVEAYNYGVRNLYELSEYLQLSEEYILEAIEQYKKIYGIGTHYGEYSITFEPLRVYRYKEI
Download Length: 462 bp
>T160570 NZ_CP070572:3878099-3878485 [Proteus mirabilis]
ATGGTTATTTATAAAACAAAGATGTTCAAAAATAGTTTCAAAAAAATAACGCTTACGAATGCAGAACTAATCGCTATCGC
TACCGAAGTCCTTGCAGGACAATTTGAGGCAGATCTAGGTGGTGGTGTTATCAAGAAACGTGCCTGTATCCAAGGAAAAG
GTAAAAGTAGCGGAATTAGAACAATTATATTTTATAAGCAAGGGAATAATTTATTCTTTGCTGATGGTTGGAAAAAATCG
AGTTTAAGCTCTAAAAAAACCAAAGAGATCACAGATGATGAACTTGAGTCCTATAAAGATCTAGCAAAAGATCTCTTCAA
TGCAAATCAAAATAAAATAGATAAAATGATTGCACTAGGCCTTTTAACAGAGGTTAGATATGACTGA
ATGGTTATTTATAAAACAAAGATGTTCAAAAATAGTTTCAAAAAAATAACGCTTACGAATGCAGAACTAATCGCTATCGC
TACCGAAGTCCTTGCAGGACAATTTGAGGCAGATCTAGGTGGTGGTGTTATCAAGAAACGTGCCTGTATCCAAGGAAAAG
GTAAAAGTAGCGGAATTAGAACAATTATATTTTATAAGCAAGGGAATAATTTATTCTTTGCTGATGGTTGGAAAAAATCG
AGTTTAAGCTCTAAAAAAACCAAAGAGATCACAGATGATGAACTTGAGTCCTATAAAGATCTAGCAAAAGATCTCTTCAA
TGCAAATCAAAATAAAATAGATAAAATGATTGCACTAGGCCTTTTAACAGAGGTTAGATATGACTGA
Antitoxin
Download Length: 108 a.a. Molecular weight: 12427.10 Da Isoelectric Point: 9.3811
>AT160570 WP_001260486.1 NZ_CP054876:1550149-1550472 [Staphylococcus aureus]
MRTSAEIGKLIKQLRKENNVNLTDFATKIGVNKSTLSRYENGSRKIPMEDIAEIANALKVTPEYLLLKNRQPENEVQHRA
AHLEGELTDDEWQRVLDYADYIRSKRK
MRTSAEIGKLIKQLRKENNVNLTDFATKIGVNKSTLSRYENGSRKIPMEDIAEIANALKVTPEYLLLKNRQPENEVQHRA
AHLEGELTDDEWQRVLDYADYIRSKRK
Download Length: 324 bp
>AT160570 NZ_CP070572:3878478-3878798 [Proteus mirabilis]
ATGACTGATAAAATGAAAGAAATGCTAAAATTTGCACAAGAAATGGAAGATGCAGGAGTCACTGATGGCAGTACAACTAA
ACGTATTGCCGCCAGAATAAAAGCGAAAGAATTACAGGCTAAGTATAAACATCCTACCCCTATGACAGGTGAAGATATAA
AAAGGATCCGTGAGCAAAATAATATCTCTCAATCTTCCCTTGCTTTGATATTGAATATGACTAAAGAAAGCGTTTCTAAG
TGGGAAAGAAACGAAATTAAGCCCAATGGTGCAGCACTACGACTTCTGCATTTAATAGATAAAAAAATATTATTCATCTA
G
ATGACTGATAAAATGAAAGAAATGCTAAAATTTGCACAAGAAATGGAAGATGCAGGAGTCACTGATGGCAGTACAACTAA
ACGTATTGCCGCCAGAATAAAAGCGAAAGAATTACAGGCTAAGTATAAACATCCTACCCCTATGACAGGTGAAGATATAA
AAAGGATCCGTGAGCAAAATAATATCTCTCAATCTTCCCTTGCTTTGATATTGAATATGACTAAAGAAAGCGTTTCTAAG
TGGGAAAGAAACGAAATTAAGCCCAATGGTGCAGCACTACGACTTCTGCATTTAATAGATAAAAAAATATTATTCATCTA
G
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|