Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) /RES-TIGR02293
Location 79802..80712 Replicon plasmid pKP20194b-p1
Accession NZ_CP054769
Organism Klebsiella pneumoniae strain KP20194b

Toxin (Protein)


Gene name - Uniprot ID A0A663AYG0
Locus tag HUS00_RS27280 Protein ID WP_004026354.1
Coordinates 79802..80272 (-) Length 157 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID A0A6P1V3Q9
Locus tag HUS00_RS27285 Protein ID WP_004026357.1
Coordinates 80269..80712 (-) Length 148 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HUS00_RS27240 75118..75432 + 315 WP_011251273.1 hypothetical protein -
HUS00_RS27245 75441..75951 + 511 Protein_81 hypothetical protein -
HUS00_RS27250 75941..76381 + 441 WP_011251275.1 hypothetical protein -
HUS00_RS27255 76806..77762 - 957 WP_011251280.1 DsbA family protein -
HUS00_RS27260 77822..78163 - 342 WP_011251281.1 hypothetical protein -
HUS00_RS27265 78177..78488 - 312 WP_011251282.1 hypothetical protein -
HUS00_RS27270 78505..78939 - 435 Protein_86 thioredoxin fold domain-containing protein -
HUS00_RS27275 78956..79653 - 698 Protein_87 IS1 family transposase -
HUS00_RS27280 79802..80272 - 471 WP_004026354.1 RES family NAD+ phosphorylase Toxin
HUS00_RS27285 80269..80712 - 444 WP_004026357.1 DUF2384 domain-containing protein Antitoxin
HUS00_RS27290 80813..81316 - 504 Protein_90 DUF4113 domain-containing protein -
HUS00_RS27295 81522..82502 - 981 WP_000019473.1 IS5-like element ISKpn26 family transposase -
HUS00_RS27300 82568..83875 + 1308 Protein_92 FepA family TonB-dependent siderophore receptor -
HUS00_RS27305 83937..84158 + 222 WP_004213615.1 hypothetical protein -
HUS00_RS27310 84301..85203 - 903 WP_004213613.1 DMT family transporter -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Mobilizable plasmid - iroN / rmpA / iucA / iucB / iucC / iucD / iutA / rmpA2 1..195034 195034
- inside IScluster/Tn - iroN / rmpA 73521..93497 19976


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(3-148)

Antitoxin

(30-89)


Sequences


Toxin        


Download         Length: 157 a.a.        Molecular weight: 17515.79 Da        Isoelectric Point: 4.6155

>T160356 WP_004026354.1 NZ_CP054769:c80272-79802 [Klebsiella pneumoniae]
VILYRLTKTKYLSTAWTGYGAKEAGGRWNSVGVSMVYVSETASLTMLETLVHLHAAQIMDSFTLLSIDVPDELIQSANMD
ELPGNWADEDAPQELADYGDAWSFTRSSVALRVPSALSPVEFNYLLNPEHPEFYGIVQKAQQIPFRFDSRLKPDRK

Download         Length: 471 bp

>T160356 NZ_CP070471:c178600-178307 [Pseudomonas aeruginosa]
ATGCCACAAGTGATCCTCTCTCCGGCTGCTCTGCGTGACCTTAAACGGCTGCGCGAGTTCTTGCACAGTAAGAGCCCAGT
TGTTGCACAGCGAGCAGCCCAAACCATCCGTTCGGCGCTGGCCCAGCTCGGGCAACAACCCGCGATGGGGCGTCCTATTG
AAGGGCTCCCGGAGGTGTTCCGCGAGTGGGTCATCCCCTTTGGGGACAGTGGTTATCTGGCGCGTTACCGCCTAGAGGGC
GAAACCGTAGTGATCTTGGCTCTGCGTCACCAGCGCGAAGCCGGGTTTATTTAG

Antitoxin


Download         Length: 148 a.a.        Molecular weight: 16480.80 Da        Isoelectric Point: 10.2498

>AT160356 WP_004026357.1 NZ_CP054769:c80712-80269 [Klebsiella pneumoniae]
MKTFSLSSTPARPQRLWQVAGLNNADGVALLGQINEGLDGKVANRITDWARITQNDLRKMSGIPSTTFSRSVKARFNPEQ
SERLVRIIRVIDRAVDLFEGDKEAAQKWLNEPNRALSWKVPADLMASETGAYEVIKLITRLEHGVYS

Download         Length: 444 bp

>AT160356 NZ_CP070471:c178875-178588 [Pseudomonas aeruginosa]
ATGTCCGCAGCTACCAAACCCATGTCTATCAAACTTGATAGCGATACCCAAAGCCGGATCAAGCAGCTAGCTGCTGCCCG
CGACCGTTCAGCGCACTGGATGATGCGCGAAGCTATCACCCAGTATGTTGAGCGCGAAGAGCGCAAGGAGGCGTTCCGCC
GCGATACCCTCGATGCTTGGCAGGAGTTTCAGGAGACTGGTTTGCATGTCTCTCTTGAGGAGACCGATCAGTGGTTGGCT
GGTTGGGGCACCGAGATTGAAGGTGGTGCACCTGCATGCCACAAGTGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A663AYG0


Antitoxin

Source ID Structure
AlphaFold DB A0A6P1V3Q9

References