Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) kacAT/DUF1778(antitoxin)
Location 4788630..4789440 Replicon chromosome
Accession NZ_CP054744
Organism Klebsiella pneumoniae strain KP20194c4

Toxin (Protein)


Gene name KacT Uniprot ID A0A0H3GMP0
Locus tag HUS04_RS23700 Protein ID WP_002887280.1
Coordinates 4788630..4789163 (-) Length 178 a.a.

Antitoxin (Protein)


Gene name KacA Uniprot ID J2E9Q7
Locus tag HUS04_RS23705 Protein ID WP_002887278.1
Coordinates 4789174..4789440 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HUS04_RS23695 4787461..4788582 + 1122 WP_002887282.1 cupin domain-containing protein -
HUS04_RS23700 4788630..4789163 - 534 WP_002887280.1 GNAT family N-acetyltransferase Toxin
HUS04_RS23705 4789174..4789440 - 267 WP_002887278.1 DUF1778 domain-containing protein Antitoxin
HUS04_RS23710 4789543..4790976 - 1434 WP_002887275.1 Cu(+)/Ag(+) sensor histidine kinase -
HUS04_RS23715 4790966..4791649 - 684 WP_002887273.1 copper response regulator transcription factor CusR -
HUS04_RS23720 4791821..4793206 + 1386 WP_002887267.1 efflux transporter outer membrane subunit -
HUS04_RS23725 4793224..4793568 + 345 WP_002887266.1 cation efflux system protein CusF -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(91-151)

Antitoxin

Vibrio phage ICP1, Orf50

(2-86)


Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 19838.70 Da        Isoelectric Point: 5.2614

>T160235 WP_002887280.1 NZ_CP054744:c4789163-4788630 [Klebsiella pneumoniae]
MEQQLTIEMIADAFSYDITGFDCGEEALNTFLKEHLKRQHDGQILRGYALVSGDTVPRLLGYYTLSGSCFERGMLPSKTQ
QKKIPYQNAPSVTLGRLAIDKSVQGQGWGEMLVAHVMRVVWGASKAVGIYGLFVEALNEKAKAFYLRLGFIQLVDENSNL
LFYPTKSIEQLFTDDES

Download         Length: 534 bp

>T160235 NZ_CP070373:7570977-7571393 [Streptomyces sp. MBT27]
ATGCTGCGCTACCTGATCGACTCGACCGCCGTCTGGCGGCTCCAGCGGAGCCCCGCGCTCAGCGAGGCATGGGGGCACGA
GACCGACGAGGGGAGCATCGGGTCGTGCCACCCGCAGCGCACCGAGTTCCGCCGCTCGGCACGCAATCTGGACGAGTACG
ACGCGATGACCGCAATGTTCGGCGATCTGTATCCGGACGCCCCCGTGCCCAAGGCCGCCTGGTCGTGGATCGAGACTGCG
CAATACAGGCTCGCCGCGCGCGGCCGGCATCAGAGCCTCTCAGTCGTCGACTGGCTGCTGTGCGCGACGGCGGCCCACCA
TGGTCTCGTGGTACTCCACGACGACAAGGACTTCGCCGCCGCGGCCGACCTGCTCCCCGACATCAGGGAGCACAACGTCA
ACCACGCACCCCACTGA

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9996.46 Da        Isoelectric Point: 10.1757

>AT160235 WP_002887278.1 NZ_CP054744:c4789440-4789174 [Klebsiella pneumoniae]
MPALKKQRIDLRLTDDDKSIIEEAAAISNQTITQFVVASASERAAEVIEQHRRMVLNEQSWSLVMEAITQPPAPNDRLKR
AAKRLQTR

Download         Length: 267 bp

>AT160235 NZ_CP070373:7570756-7570974 [Streptomyces sp. MBT27]
ATGTCCGCCACGCAGATCGACATCGACGATGAAGCGCTCGCCGAGGCCATGCGACTGTCCGGCTCCCGCACCAAAAAGGA
GACAGTCAACCTCGCCCTGCGGGAGTACAGCGAGCGGCGGCGCCGCACCGAGGCCCGCCTCAGGCACTTCAAGCTGGCGC
AGGACTGGGACGACGAGAGTTTCTGGCGTCTGCACGCCGCCGAGAAAGGCGCCTCCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 5ZGN
PDB 5XUN

Antitoxin

Source ID Structure
PDB 5ZGN
AlphaFold DB A0A0H3GLZ1

References