Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/YafQ-DinJ |
| Location | 2161040..2161590 | Replicon | chromosome |
| Accession | NZ_CP054477 | ||
| Organism | Treponema denticola strain OMZ 823 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | Q73QD8 |
| Locus tag | E4N80_RS10100 | Protein ID | WP_002665928.1 |
| Coordinates | 2161040..2161321 (-) | Length | 94 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | Q73QD7 |
| Locus tag | E4N80_RS10105 | Protein ID | WP_002665927.1 |
| Coordinates | 2161318..2161590 (-) | Length | 91 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4N80_RS10070 (E4N80_10040) | 2156091..2157218 | - | 1128 | WP_253699100.1 | hypothetical protein | - |
| E4N80_RS10075 (E4N80_10045) | 2157215..2157775 | - | 561 | WP_253699101.1 | hypothetical protein | - |
| E4N80_RS10080 (E4N80_10050) | 2157908..2158972 | - | 1065 | WP_253699102.1 | ankyrin repeat domain-containing protein | - |
| E4N80_RS10085 (E4N80_10055) | 2159026..2159433 | - | 408 | WP_253699103.1 | hypothetical protein | - |
| E4N80_RS10090 (E4N80_10060) | 2159453..2160304 | - | 852 | WP_253699104.1 | DUF2262 domain-containing protein | - |
| E4N80_RS10095 (E4N80_10065) | 2160342..2160965 | - | 624 | WP_253699105.1 | hypothetical protein | - |
| E4N80_RS10100 (E4N80_10070) | 2161040..2161321 | - | 282 | WP_002665928.1 | type II toxin-antitoxin system YafQ family toxin | Toxin |
| E4N80_RS10105 (E4N80_10075) | 2161318..2161590 | - | 273 | WP_002665927.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
| E4N80_RS10110 (E4N80_10080) | 2161656..2161865 | - | 210 | WP_253699106.1 | hypothetical protein | - |
| E4N80_RS10115 (E4N80_10085) | 2161916..2162632 | - | 717 | WP_253682847.1 | hypothetical protein | - |
| E4N80_RS10120 (E4N80_10090) | 2162677..2163246 | - | 570 | WP_002672563.1 | hypothetical protein | - |
| E4N80_RS10125 (E4N80_10095) | 2163302..2163973 | - | 672 | WP_147625250.1 | hypothetical protein | - |
| E4N80_RS10130 (E4N80_10100) | 2163975..2164124 | - | 150 | WP_253688683.1 | hypothetical protein | - |
| E4N80_RS10135 (E4N80_10105) | 2164176..2164334 | - | 159 | WP_010956759.1 | hypothetical protein | - |
| E4N80_RS10140 (E4N80_10110) | 2164411..2165217 | - | 807 | WP_253699107.1 | DUF4261 domain-containing protein | - |
| E4N80_RS10145 (E4N80_10115) | 2165325..2165648 | - | 324 | WP_002685254.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 94 a.a. Molecular weight: 11113.98 Da Isoelectric Point: 9.8023
>T159793 WP_002665928.1 NZ_CP054477:c2161321-2161040 [Treponema denticola]
MKYEIKFTNQFKKDIKLAKKQNKNLDKLLKVIDLLSNGEKLEAKYRDHDLSGNYKGTRECHIEPDWLLVYEIRNDVLVLM
LYRLGSHSELFKK
MKYEIKFTNQFKKDIKLAKKQNKNLDKLLKVIDLLSNGEKLEAKYRDHDLSGNYKGTRECHIEPDWLLVYEIRNDVLVLM
LYRLGSHSELFKK
Download Length: 282 bp
>T159793 NZ_CP070144:3558736-3559146 [Klebsiella oxytoca]
GTGGTCCTGTGGCAATCTGATTTACGCATCTCGTGGCGAGCGCAATGGTTCTCACTGTTGATGCACGGCGTGGTGGCGGC
GCTGGTGCTGGTGTTGCCCTGGCCGCTGAGCTATACCCCGCTGTGGCTGATACTGCTGTCGCTGGTGGTGTTCGACTGCG
TGCGCAGCCAACGGCGGATCCATGCCCGACAGGGGGAAATAAAGTTGCTGATTGACTCTCGCCTGCGCTGGCAAAAAGCG
GAGTGGGATATCGTCGGCACCCCGTGGGTAATCAATAGCGGAATGCTGCTGCGTCTGCGAAATACGGAAAACCAACGCAC
TCAGCATCTATGGGTGGCGGCGGATAGCATGGACGCGGGCGAGTGGCGCGATCTGCGTCGGCTGGTGTTACAGAAACCGA
CGCAAGATTAA
GTGGTCCTGTGGCAATCTGATTTACGCATCTCGTGGCGAGCGCAATGGTTCTCACTGTTGATGCACGGCGTGGTGGCGGC
GCTGGTGCTGGTGTTGCCCTGGCCGCTGAGCTATACCCCGCTGTGGCTGATACTGCTGTCGCTGGTGGTGTTCGACTGCG
TGCGCAGCCAACGGCGGATCCATGCCCGACAGGGGGAAATAAAGTTGCTGATTGACTCTCGCCTGCGCTGGCAAAAAGCG
GAGTGGGATATCGTCGGCACCCCGTGGGTAATCAATAGCGGAATGCTGCTGCGTCTGCGAAATACGGAAAACCAACGCAC
TCAGCATCTATGGGTGGCGGCGGATAGCATGGACGCGGGCGAGTGGCGCGATCTGCGTCGGCTGGTGTTACAGAAACCGA
CGCAAGATTAA
Antitoxin
Download Length: 91 a.a. Molecular weight: 10205.78 Da Isoelectric Point: 5.1486
>AT159793 WP_002665927.1 NZ_CP054477:c2161590-2161318 [Treponema denticola]
MATTNLNIRTDKEMKERAEAIFFELGLNMTTAINIFLRTTIRENGIPFALKLDIPNAITASAIEEGRKIAYDDTVKKYSN
IDDLRKALEI
MATTNLNIRTDKEMKERAEAIFFELGLNMTTAINIFLRTTIRENGIPFALKLDIPNAITASAIEEGRKIAYDDTVKKYSN
IDDLRKALEI
Download Length: 273 bp
>AT159793 NZ_CP070144:3558489-3558755 [Klebsiella oxytoca]
ATGGATATTAACAATAAAGCTCGCATCCACTGGGCATGCCGCCGGGGAATGCGTGAACTCGATATCTCCATCATGCCGTT
TTTTGAGCATGAGTACGATACGCTCAGTGATGACGATAAGCGGTTGTTCATCCGCCTGCTGGAAAATGACGATCCGGACC
TGTTCAACTGGTTGATGAACCATGGCGAACCGGCTGATGCAGAACTGCAGCGGATGGTAAAATTAATTCAGACACGGAAT
CGGGAACGTGGTCCTGTGGCAATCTGA
ATGGATATTAACAATAAAGCTCGCATCCACTGGGCATGCCGCCGGGGAATGCGTGAACTCGATATCTCCATCATGCCGTT
TTTTGAGCATGAGTACGATACGCTCAGTGATGACGATAAGCGGTTGTTCATCCGCCTGCTGGAAAATGACGATCCGGACC
TGTTCAACTGGTTGATGAACCATGGCGAACCGGCTGATGCAGAACTGCAGCGGATGGTAAAATTAATTCAGACACGGAAT
CGGGAACGTGGTCCTGTGGCAATCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|