Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /BrnT(toxin)
Location 1889400..1889877 Replicon chromosome
Accession NZ_CP054140
Organism Desulfobulbus oligotrophicus strain Prop6

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag HP555_RS08510 Protein ID WP_199261517.1
Coordinates 1889605..1889877 (-) Length 91 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag HP555_RS08505 Protein ID WP_199261515.1
Coordinates 1889400..1889624 (-) Length 75 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HP555_RS08485 1885489..1886742 - 1254 WP_199261501.1 oligosaccharide flippase family protein -
HP555_RS08490 1886739..1888457 - 1719 WP_199261509.1 phospholipid carrier-dependent glycosyltransferase -
HP555_RS08495 1888441..1888863 - 423 WP_199261511.1 DUF86 domain-containing protein -
HP555_RS08500 1888853..1889242 - 390 WP_199261513.1 nucleotidyltransferase domain-containing protein -
HP555_RS08505 1889400..1889624 - 225 WP_199261515.1 hypothetical protein Antitoxin
HP555_RS08510 1889605..1889877 - 273 WP_199261517.1 BrnT family toxin Toxin
HP555_RS08515 1890207..1891424 - 1218 WP_199261519.1 thioredoxin domain-containing protein -
HP555_RS08520 1891436..1893520 - 2085 WP_199261521.1 tetratricopeptide repeat protein -
HP555_RS08525 1893912..1894004 - 93 Protein_1666 prepilin-type N-terminal cleavage/methylation domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease toxin, BrnT, of type II toxin-antitoxin system

(5-81)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 91 a.a.        Molecular weight: 10587.97 Da        Isoelectric Point: 4.7132

>T158772 WP_199261517.1 NZ_CP054140:c1889877-1889605 [Desulfobulbus oligotrophicus]
MKFVFDSQKSAANKQKHGIDFVEAQELWDDWDLLEIPDKIVEDENRCLVIGKIGIKHWSAVITYRDDTIQIISVRRSREK
EVEYYESTGI

Download         Length: 273 bp

>T158772 NZ_CP069815:c747898-747521 [Raoultella planticola]
ATGCAAACACAACCTGTTCCTCCGAAACGGGAGGTTTCGCCACGCCCGTCACCCGTGGCGATCTGGCAGCGCCTCCTGAG
TCACCTGCTGGACCGTCACTACGGTCTGACGCTCAACGACACGCCATTTGGCAAAGATGGTGTGATCCAAGAGCATATCG
ATGCCGGTATCTCACTGTGCGACGCGGTGAATTTCATCGTGGAGAAATACGACCTGGTACGCACTGATCGTCGCGGTTTT
AACGCGGAAACTCAGTCGCCGCTTCTCACCAGTATCGATATTCTCCGCGCCCGCAAAGCCACCGGGCTGATGACCCGTCA
TAGCTACAGGGCCGTTACCGACATCACCACCGGCAAATACCGTGAGGTGCAACCATGA

Antitoxin


Download         Length: 75 a.a.        Molecular weight: 8503.73 Da        Isoelectric Point: 9.9482

>AT158772 WP_199261515.1 NZ_CP054140:c1889624-1889400 [Desulfobulbus oligotrophicus]
MKAQGFDTKFEAGEDLTDDLDFSKARRVNQQNRRVNIDFPAWVVEGLDKQAKRLGITRQALVKVWIAEKLKEAV

Download         Length: 225 bp

>AT158772 NZ_CP069815:c748274-747948 [Raoultella planticola]
ATCGCCGCCCCTTGGTGGGGGCTTAAACGCGATATCACCCCCTGTTTTGGCGCACGTCTGGTGCAGGAGGGCAACCGGCT
GCATTACCTGAACGACCGCGCCAGCATCACCGGCACCTTCAGCGACGCGGATTTACGCCATCTCGACCAGGCATTCCCGC
TACTGCTGAAGCAACTGGAGCTGATGCTGCTTTCCGGTGAGCTGAATCCCCGTCATCAGCACTGCGTCACGCTGTATGCA
AAAGGGCTGATATGCGAGGCCGACAGCCTCGGCTCGCACGGGTACGTCTATCTCGCAATTTACCCGACACCTGCAACAAC
AGAATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References