Detailed information of TA system TA158104

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): FicTA/-
• Location: 1027039..1027574
• Replicon: chromosome
• Accession: NZ_CP053841
• Organism: Campylobacter blaseri strain LMG 30333

Toxin (Protein)

• Gene name: Fic
• Uniprot ID: -
• Locus tag: CBLAS_RS05300
• Protein ID: WP_106872756.1
• Coordinates: 1027278..1027574 (+)
• Length: 99 a.a.

Antitoxin (Protein)

• Gene name: Fti
• Uniprot ID: -
• Locus tag: CBLAS_RS05295
• Protein ID: WP_106872758.1
• Coordinates: 1027039..1027278 (+)
• Length: 80 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
CBLAS_RS05280	1023613..1024524	+	912	WP_106872764.1	Abi family protein	-
CBLAS_RS05285	1025460..1026122	-	663	WP_106872762.1	relaxase/mobilization nuclease domain-containing protein	-
CBLAS_RS05290	1026128..1026676	-	549	WP_106872760.1	hypothetical protein	-
CBLAS_RS05295	1027039..1027278	+	240	WP_106872758.1	hypothetical protein	Antitoxin
CBLAS_RS05300	1027278..1027574	+	297	WP_106872756.1	hypothetical protein	Toxin
CBLAS_RS05305	1027740..1028105	-	366	WP_133169631.1	hypothetical protein	-
CBLAS_RS05310	1028087..1028320	-	234	WP_106872752.1	hypothetical protein	-
CBLAS_RS05315	1028352..1028567	-	216	WP_106872750.1	hypothetical protein	-
CBLAS_RS05320	1029366..1029668	-	303	WP_133169630.1	hypothetical protein	-
CBLAS_RS05325	1030072..1031347	-	1276	Protein_1031	tyrosine-type recombinase/integrase	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Antitoxin

No domain identified.

Sequences

Toxin

Protein

• Length: 99 a.a.
• Molecular weight: 11738.47 Da
• Isoelectric Point: 8.0125

>T158104 WP_106872756.1 NZ_CP053841:1027278-1027574 [Campylobacter blaseri]
MDKTLNFDNEIPENNFDRQLLNSNLIGAKNLMDLNKRERILSSIQIEKLSKNFIKGNFDYQHLKNIHKYIFQDIYDWAEK
YSLEMCLTGNFTKTIKFI

Nucleotide

• Length: 297 bp

>T158104 NZ_CP069571:3087945-3088048 [Escherichia coli]
GGCAAGGCAACTAAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATAC
AGGAATCGTGTTCGGTCTCTTTTT

Antitoxin

Protein

• Length: 80 a.a.
• Molecular weight: 9364.77 Da
• Isoelectric Point: 4.8780

>AT158104 WP_106872758.1 NZ_CP053841:1027039-1027278 [Campylobacter blaseri]
MIEEYPEVYSFEESIKILDKYKNKITQEQYNSIKSNIGNFAIEDMYLNEKDILTSIRILKGETTADEKIKKLKKEWGLI

Nucleotide

• Length: 240 bp

>AT158104 NZ_CP069571:c3088086-3087815 [Escherichia coli]
AAAGTCAGCGAAGGAAATGCTTCTGGCTTTTAACAGATAAAAAGAGACCGAACACGATTCCTGTATTCGGTCCAGGGAAA
TGGCTCTTGGGAGAGAGCCGTGCGCTAAAAGTTGGCATTAATGCAGGCTTAGTTGCCTTGCCCTTTAAGAATAGATGACG
ACGCCAGGTTTTCCAGTTTGCGTGCAAAATGGTCAATAAAAAGCGCGGTAGTCATCAGCTTAAATGTTAAAAACCGCCCG
TTCTGGTGAAAGAACTGAGGCGGTTTTTTTAT