Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | tacAT/DUF1778(antitoxin) |
| Location | 3371041..3371840 | Replicon | chromosome |
| Accession | NZ_CP053683 | ||
| Organism | Proteus mirabilis strain MPE0027 | ||
Toxin (Protein)
| Gene name | TacT3 | Uniprot ID | A0A8E3RD10 |
| Locus tag | HNV02_RS15885 | Protein ID | WP_004247966.1 |
| Coordinates | 3371316..3371840 (+) | Length | 175 a.a. |
Antitoxin (Protein)
| Gene name | TacA3 | Uniprot ID | B4EVS2 |
| Locus tag | HNV02_RS15880 | Protein ID | WP_004247964.1 |
| Coordinates | 3371041..3371319 (+) | Length | 93 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HNV02_RS15855 | 3366391..3367473 | + | 1083 | WP_004242680.1 | peptide chain release factor 1 | - |
| HNV02_RS15860 | 3367473..3368321 | + | 849 | WP_004247962.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| HNV02_RS15865 | 3368299..3369114 | + | 816 | WP_004242688.1 | invasion regulator SirB1 | - |
| HNV02_RS15870 | 3369172..3370026 | + | 855 | WP_004242689.1 | 3-deoxy-8-phosphooctulonate synthase | - |
| HNV02_RS15875 | 3370034..3370963 | + | 930 | WP_017628160.1 | TIGR01212 family radical SAM protein | - |
| HNV02_RS15880 | 3371041..3371319 | + | 279 | WP_004247964.1 | DUF1778 domain-containing protein | Antitoxin |
| HNV02_RS15885 | 3371316..3371840 | + | 525 | WP_004247966.1 | hypothetical protein | Toxin |
| HNV02_RS15890 | 3371921..3373621 | - | 1701 | WP_017628159.1 | C4-dicarboxylic acid transporter DauA | - |
| HNV02_RS15900 | 3374585..3375526 | + | 942 | WP_004242695.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 175 a.a. Molecular weight: 19192.12 Da Isoelectric Point: 9.3561
>T157451 WP_004247966.1 NZ_CP053683:3371316-3371840 [Proteus mirabilis]
MTIPNWHEEAISKKHNRNGFNCGDAVLNQFLYRHARQNHENGSAKTYLAINNSNNIILGYYSLCPASIEFERTPELIKHG
LARHDIPVFKLARLATDLSVQGKGLGGQLLLAAGRRCLSVASELGGVALLIDAKNERVANWYISYGAIPLLDTPLSLLIS
FKTIYTALSMANKI
MTIPNWHEEAISKKHNRNGFNCGDAVLNQFLYRHARQNHENGSAKTYLAINNSNNIILGYYSLCPASIEFERTPELIKHG
LARHDIPVFKLARLATDLSVQGKGLGGQLLLAAGRRCLSVASELGGVALLIDAKNERVANWYISYGAIPLLDTPLSLLIS
FKTIYTALSMANKI
Download Length: 525 bp
>T157451 NZ_CP069319:c4818323-4817946 [Kosakonia cowanii]
ATGGTGACTATGAGCAACCTTGCGTTATTTGATACCAATATCTTGATTGATCTGTTTAATGGCCGGGAAGAGGCTGCTAA
CACTTTTGAAGATTACAATGGCAGGATCGCCATCAGCCTGATTAGCTGGATTGAAGTGCTGGTTGGCGCTAAAAAAGTAG
GGCAGGAAAATGCGACACGCGCTTTTCTTGATTCGCTTGAGGTCATAGAGATTTCCCATCCCATAGCAGAACGAAGCATT
GAGCTGCGCCAGGCGTATCGCATGAAGCTGCCCGATGCCATTATTCTTGCAACAGCTCAGATACATAGCCGTTGCCTCGT
TACGCGCAATATCAAAGATTTTGCGTCTGTAACAGGGGTTTTCACCCCATATCAGTAA
ATGGTGACTATGAGCAACCTTGCGTTATTTGATACCAATATCTTGATTGATCTGTTTAATGGCCGGGAAGAGGCTGCTAA
CACTTTTGAAGATTACAATGGCAGGATCGCCATCAGCCTGATTAGCTGGATTGAAGTGCTGGTTGGCGCTAAAAAAGTAG
GGCAGGAAAATGCGACACGCGCTTTTCTTGATTCGCTTGAGGTCATAGAGATTTCCCATCCCATAGCAGAACGAAGCATT
GAGCTGCGCCAGGCGTATCGCATGAAGCTGCCCGATGCCATTATTCTTGCAACAGCTCAGATACATAGCCGTTGCCTCGT
TACGCGCAATATCAAAGATTTTGCGTCTGTAACAGGGGTTTTCACCCCATATCAGTAA
Antitoxin
Download Length: 93 a.a. Molecular weight: 10252.82 Da Isoelectric Point: 5.1369
>AT157451 WP_004247964.1 NZ_CP053683:3371041-3371319 [Proteus mirabilis]
MAQALVENSERVSIRITTEDKSLLVRAASLENTNLTEFVLRNIVPVARQVIENNERLKLSEKDTLRVMELLDNPPKPNAK
LLAAAFALPDNA
MAQALVENSERVSIRITTEDKSLLVRAASLENTNLTEFVLRNIVPVARQVIENNERLKLSEKDTLRVMELLDNPPKPNAK
LLAAAFALPDNA
Download Length: 279 bp
>AT157451 NZ_CP069319:c4818559-4818317 [Kosakonia cowanii]
ATGGATGTTCTCTCTGGAGTGATTATGGGGCGTATTTTGTTGGATTTATCAGATGATGTTATACGCAGGCTCGATAGCTT
AAAGCAGCAGCGTAACCTTCCTCGTGCTGAATTATTACGAGAAGCGGTTGAGCAGTATCTTGAAAAGCAGAACACGACAA
GCGCTCGCAATGCTTTAGGTCTATGGGGAGGTGAGGGCGAAGATGGTCTTGAATTTGAGAGAAAACTGCGCGAGGAATGG
TGA
ATGGATGTTCTCTCTGGAGTGATTATGGGGCGTATTTTGTTGGATTTATCAGATGATGTTATACGCAGGCTCGATAGCTT
AAAGCAGCAGCGTAACCTTCCTCGTGCTGAATTATTACGAGAAGCGGTTGAGCAGTATCTTGAAAAGCAGAACACGACAA
GCGCTCGCAATGCTTTAGGTCTATGGGGAGGTGAGGGCGAAGATGGTCTTGAATTTGAGAGAAAACTGCGCGAGGAATGG
TGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|