Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YoeB-RelB
Location 2355682..2356205 Replicon chromosome
Accession NZ_CP051514
Organism Paraburkholderia aromaticivorans strain AR20-38

Toxin (Protein)


Gene name relB Uniprot ID -
Locus tag HF916_RS11055 Protein ID WP_206001821.1
Coordinates 2355951..2356205 (+) Length 85 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag HF916_RS11050 Protein ID WP_168788829.1
Coordinates 2355682..2355942 (+) Length 87 a.a.

Genomic Context

HF916_RS11045HF916_RS11050HF916_RS11055HF916_RS11060HF916_RS11065HF916_RS11070HF916_RS11075HF916_RS11085HF916_RS11090HF916_RS11095HF916_RS11035HF916_RS11040HF916_RS11080
Location: 2352670..2355192 (2523 bp)
Type: Others
Protein ID: WP_168788828.1
Location: 2355682..2355942 (261 bp)
Type: Antitoxin
Protein ID: WP_168788829.1
Location: 2355951..2356205 (255 bp)
Type: Toxin
Protein ID: WP_206001821.1
Location: 2356265..2356537 (273 bp)
Type: Others
Protein ID: WP_168788831.1
Location: 2356587..2356853 (267 bp)
Type: Others
Protein ID: WP_168788832.1
Location: 2356946..2357098 (153 bp)
Type: Others
Protein ID: WP_168788833.1
Location: 2357312..2357884 (573 bp)
Type: Others
Protein ID: WP_168788834.1
Location: 2358325..2358912 (588 bp)
Type: Others
Protein ID: WP_168788836.1
Location: 2358983..2359237 (255 bp)
Type: Others
Protein ID: WP_168788837.1
Location: 2359596..2359895 (300 bp)
Type: Others
Protein ID: WP_168788838.1
Location: 2351084..2351680 (597 bp)
Type: Others
Protein ID: WP_168788826.1
Location: 2351661..2352047 (387 bp)
Type: Others
Protein ID: WP_168788827.1
Location: 2357943..2358257 (315 bp)
Type: Others
Protein ID: WP_168788835.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
HF916_RS110352351084..2351680-597WP_168788826.1DUF1173 family protein-
HF916_RS110402351661..2352047-387WP_168788827.1DUF1173 family protein-
HF916_RS110452352670..2355192+2523WP_168788828.1adenosylcobalamin-dependent ribonucleoside-diphosphate reductase-
HF916_RS110502355682..2355942+261WP_168788829.1type II toxin-antitoxin system prevent-host-death family antitoxinAntitoxin
HF916_RS110552355951..2356205+255WP_206001821.1Txe/YoeB family addiction module toxinToxin
HF916_RS110602356265..2356537+273WP_168788831.1hypothetical protein-
HF916_RS110652356587..2356853+267WP_168788832.1hypothetical protein-
HF916_RS110702356946..2357098+153WP_168788833.1hypothetical protein-
HF916_RS110752357312..2357884+573WP_168788834.1hypothetical protein-
HF916_RS110802357943..2358257-315WP_168788835.1hypothetical protein-
HF916_RS110852358325..2358912+588WP_168788836.1hypothetical protein-
HF916_RS110902358983..2359237+255WP_168788837.1hypothetical protein-
HF916_RS110952359596..2359895+300WP_168788838.1hypothetical protein-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(1-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 9983.34 Da        Isoelectric Point: 8.8663

>T154364 WP_206001821.1 NZ_CP051514:2355951-2356205 [Paraburkholderia aromaticivorans]
MNILWTAEAWDDYVYWQGPDKKTLKRINQLVKDMQRSPFDGVGKPESLKQNLTGFWSRRIDETNRLVYEVAGTQINIVSC
RYHY

Download         Length: 255 bp

>T154364 NZ_CP068033:1867613-1867715 [Klebsiella pneumoniae]
GCAAGGCGACTTAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATACA
GGAATCGTATTCGGTCTCTTTTT

Antitoxin


Download         Length: 87 a.a.        Molecular weight: 9676.07 Da        Isoelectric Point: 7.3198

>AT154364 WP_168788829.1 NZ_CP051514:2355682-2355942 [Paraburkholderia aromaticivorans]
MRTIPFSDARANLKRVIDQVVDDVDVTLITRRDAPNAILMSQEHYDSLMETVHLLRSPANVAHLERSIAQARAGKVKPRK
LAEDAE

Download         Length: 261 bp

>AT154364 NZ_CP068033:c1867722-1867577 [Klebsiella pneumoniae]
TAAAGATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAG
TTGGCATTAATGCAGGCTAAGTCGCCTTGCACTATAAGAATAGTTTAACGCGTCAGCTTTTCCAGT

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References