153546

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yxiD-yxxD/-
Location 3445617..3446405 Replicon chromosome
Accession NZ_CP051011
Organism Bacillus velezensis strain BY6

Toxin (Protein)


Gene name yxiD Uniprot ID -
Locus tag HEQ83_RS16860 Protein ID WP_079891856.1
Coordinates 3446064..3446405 (-) Length 114 a.a.

Antitoxin (Protein)


Gene name yxxD Uniprot ID -
Locus tag HEQ83_RS16855 Protein ID WP_014305975.1
Coordinates 3445617..3446054 (-) Length 146 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HEQ83_RS16820 3441145..3441681 + 537 WP_003151296.1 chromate resistance efflux protein ChrA -
HEQ83_RS16825 3441708..3441926 - 219 WP_003151295.1 hypothetical protein -
HEQ83_RS16830 3441923..3442468 - 546 WP_003151294.1 flavodoxin family protein -
HEQ83_RS16835 3442591..3443472 + 882 WP_003151293.1 LysR family transcriptional regulator -
HEQ83_RS16840 3443558..3444274 - 717 WP_024085893.1 endonuclease V -
HEQ83_RS16845 3444314..3444814 - 501 WP_015387596.1 hypothetical protein -
HEQ83_RS16850 3445006..3445446 - 441 WP_025649364.1 SMI1/KNR4 family protein -
HEQ83_RS16855 3445617..3446054 - 438 WP_014305975.1 SMI1/KNR4 family protein Antitoxin
HEQ83_RS16860 3446064..3446405 - 342 WP_079891856.1 HNH endonuclease Toxin
HEQ83_RS16865 3447024..3447362 - 339 Protein_3247 transposase -
HEQ83_RS16870 3448001..3448466 - 466 Protein_3248 DUF2004 domain-containing protein -
HEQ83_RS16875 3448468..3448993 - 526 Protein_3249 HNH endonuclease -
HEQ83_RS16880 3449163..3449468 - 306 WP_003151282.1 hypothetical protein -
HEQ83_RS16885 3449485..3451230 - 1746 WP_046341443.1 ribonuclease YeeF family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 114 a.a.        Molecular weight: 13224.74 Da        Isoelectric Point: 9.6942

>T153546 WP_079891856.1 NZ_CP051011:c3446405-3446064 [Bacillus velezensis]
IKEALRNNNYEKLTPKETAKHRSKFTSSLKDRLIAEWEEKTNQKWPRYTEEVFDKHGEVARSIGQPYDAHHIIENNFGGP
HEWWNIHPAKYPDEHQAGIHGKGAPSGKLFPRR

Download         Length: 342 bp

>T153546 NZ_CP066958:432670-432822 [Xanthomonas campestris]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTCTCGGCTGGCATGATGACTGGCTGTAACACCATGGCTGGTGC
CGGAAAGGACATGCAGGGTGCGGGTGACAAGGTCGAGAAGACCGCCGACAAATGCAGCGACGGTAAGTGCTGA

Antitoxin


Download         Length: 146 a.a.        Molecular weight: 17050.05 Da        Isoelectric Point: 3.8675

>AT153546 WP_014305975.1 NZ_CP051011:c3446054-3445617 [Bacillus velezensis]
MAEFEFINHLENKTYKVPEEDILKAEQRMNVDIPNDLKQLYLEVGYGFIKGESDNAINRILGPGAVADIRLREGIFEFDP
DLDELYDDENKLIFFEVNEGVYISIDLRLANNPIFYFDTQIAESLEDFFKKFLNDNEYYIDLIED

Download         Length: 438 bp

>AT153546 NZ_CP066958:432899-433033 [Xanthomonas campestris]
ATGAAGCGTGCAATTGCATTGTTGGTGCTGTCGATGTTGTCGGTTGGAATGCTGGCGGGTTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGCAGGGCGCTGGCGAGAAGGTGGAAGACGCCGCGCGCAAGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References